Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 MRPS36P5-201ENST00000551909 298 ntBASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 NACAP3-201ENST00000552100 481 ntBASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 AC090888.2-201ENST00000559765 1144 ntBASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 MIR5694-201ENST00000581190 76 ntBASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 AP001004.1-201ENST00000582468 324 ntBASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 MIR3616-201ENST00000584070 92 ntBASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 AL645944.1-201ENST00000603857 493 ntBASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 AC018714.1-201ENST00000605028 208 ntBASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 AC107294.1-201ENST00000609524 467 ntBASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 OR10AB1P-201ENST00000609613 938 ntBASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 AL589743.7-201ENST00000612637 233 ntBASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 AL031667.3-201ENST00000620124 655 ntBASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
KCNIP3Q9Y2W7 AC010889.1-201ENST00000566193 2666 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 UBE2L2-201ENST00000254302 429 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 Y_RNA.46-201ENST00000362695 102 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 PTMAP2-201ENST00000397627 327 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 NDUFS5P1-201ENST00000405668 289 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 AC007064.1-201ENST00000412238 351 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 MORF4L1P6-201ENST00000418771 268 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 GPM6BP2-201ENST00000432046 144 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 RPS12P2-201ENST00000439728 269 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 GPM6BP1-201ENST00000446387 144 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 RBM43P1-201ENST00000476891 1081 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 RPS15AP34-201ENST00000487776 387 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 AC026801.1-201ENST00000497178 464 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 EIF4EP3-201ENST00000498782 656 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 AC022447.1-201ENST00000515358 464 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 RNU1-103P-201ENST00000516502 125 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 RN7SKP57-201ENST00000517248 293 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 PRELID2P1-201ENST00000552837 301 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 RPS3AP4-201ENST00000555161 764 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 AL356432.3-201ENST00000568952 465 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 MIR5004-201ENST00000579078 107 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 MIR5092-201ENST00000583139 88 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 MIR3117-201ENST00000584034 78 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 AC025588.2-201ENST00000604851 466 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 AC021755.4-201ENST00000616620 456 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 MTND5P1-201ENST00000445440 1375 ntBASIC2.23□□□□□ -2.05
KCNIP3Q9Y2W7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AC010329.5-201ENST00000623497 2174 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 Y_RNA.97-201ENST00000363094 102 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 RNU6-253P-201ENST00000384730 105 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 U3.26-201ENST00000391236 204 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 RPL23AP39-201ENST00000415533 405 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AC104651.1-201ENST00000427559 735 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AL831737.1-201ENST00000441288 271 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AL606517.1-201ENST00000446914 387 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AC011753.1-201ENST00000451001 220 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 MTATP6P7-201ENST00000453315 681 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 RPL37P6-201ENST00000460682 294 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 MTND2P14-201ENST00000482139 351 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 RNU6-1003P-201ENST00000517099 105 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 MRPS36P3-201ENST00000519284 130 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AP006587.4-201ENST00000526053 529 ntBASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.22□□□□□ -2.05
KCNIP3Q9Y2W7 VN1R90P-201ENST00000595717 726 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms