Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 AC004865.1-201ENST00000442276 1003 ntBASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 AL031183.1-201ENST00000457667 207 ntBASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 RPL30P12-201ENST00000474666 353 ntBASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 AC016065.2-201ENST00000514530 444 ntBASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 OSBPL9P3-201ENST00000534523 595 ntBASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 MIR4504-201ENST00000577413 92 ntBASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 AL360085.1-201ENST00000604713 532 ntBASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 AC123912.5-201ENST00000605470 343 ntBASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 AC095031.1-201ENST00000623685 672 ntBASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 AC068620.4-201ENST00000636730 1182 ntBASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.52□□□□□ -2.17
PHRF1Q9P1Y6 MIR627-201ENST00000384979 97 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 RNU4-78P-201ENST00000410940 126 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AC010385.1-201ENST00000412374 256 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 UBE2V1P9-201ENST00000414760 368 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 HMGN3P1-201ENST00000453847 193 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 BLNK-209ENST00000495266 440 ntTSL 5 BASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 RNU6-113P-201ENST00000516653 101 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 SNRPGP16-201ENST00000533275 226 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AC009268.1-201ENST00000561352 1203 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 SUB1P4-201ENST00000566062 339 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 VN1R107P-201ENST00000601784 209 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AC079610.2-201ENST00000604818 690 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AC009090.3-201ENST00000616553 565 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AC021755.4-201ENST00000616620 456 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AC073592.7-201ENST00000623659 507 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 DDX43P2-201ENST00000604753 1354 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 RNU6-1226P-201ENST00000384317 107 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 MT-TC-201ENST00000387405 66 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 RNA5SP465-201ENST00000391195 109 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AL136372.1-201ENST00000403060 228 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 RNA5SP56-201ENST00000410277 118 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 RPL7P30-201ENST00000420888 709 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AL022400.1-201ENST00000423946 935 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 TRIM60P13-201ENST00000432350 1283 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AC234775.1-201ENST00000454247 670 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AL583843.1-201ENST00000456070 346 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AC087854.1-201ENST00000519706 414 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AL161629.2-201ENST00000615347 275 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AC018755.4-201ENST00000619715 454 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 AL109659.3-201ENST00000624985 950 ntBASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.51□□□□□ -2.17
PHRF1Q9P1Y6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
PHRF1Q9P1Y6 RNU6-1105P-201ENST00000384774 107 ntBASIC1.5□□□□□ -2.17
PHRF1Q9P1Y6 SNORD56-201ENST00000413522 71 ntBASIC1.5□□□□□ -2.17
PHRF1Q9P1Y6 TATDN1P1-201ENST00000414123 891 ntBASIC1.5□□□□□ -2.17
PHRF1Q9P1Y6 CYCSP33-201ENST00000414485 327 ntBASIC1.5□□□□□ -2.17
PHRF1Q9P1Y6 UBE2D3P2-201ENST00000424409 445 ntBASIC1.5□□□□□ -2.17
PHRF1Q9P1Y6 AL645638.1-201ENST00000440519 361 ntBASIC1.5□□□□□ -2.17
PHRF1Q9P1Y6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.5□□□□□ -2.17
PHRF1Q9P1Y6 AC093852.1-201ENST00000503587 266 ntBASIC1.5□□□□□ -2.17
PHRF1Q9P1Y6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.5□□□□□ -2.17
PHRF1Q9P1Y6 AC021146.8-201ENST00000507455 733 ntBASIC1.5□□□□□ -2.17
PHRF1Q9P1Y6 RNU6-488P-201ENST00000515918 99 ntBASIC1.5□□□□□ -2.17
PHRF1Q9P1Y6 AC008739.2-201ENST00000597006 317 ntBASIC1.5□□□□□ -2.17
PHRF1Q9P1Y6 AC099654.7-201ENST00000635788 2127 ntBASIC1.5□□□□□ -2.17
PHRF1Q9P1Y6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 RNA5SP38-201ENST00000410750 119 ntBASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 RNU4-72P-201ENST00000410754 173 ntBASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 RNU6-272P-201ENST00000411028 104 ntBASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 AL121578.1-201ENST00000428051 892 ntBASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 AL121601.2-201ENST00000438019 707 ntBASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 AC097499.1-201ENST00000444277 208 ntBASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 EIF1AXP2-201ENST00000555940 413 ntBASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 AC106791.2-201ENST00000604680 391 ntBASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 AL449363.1-201ENST00000617815 186 ntBASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 AL445493.3-201ENST00000619568 477 ntBASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 AC012640.5-201ENST00000623897 319 ntBASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 U6.107-201ENST00000637108 79 ntBASIC1.49□□□□□ -2.17
PHRF1Q9P1Y6 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 RNU6-263P-201ENST00000363811 107 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 RNU6-173P-201ENST00000364215 104 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 SNORA62.1-201ENST00000364287 154 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 RNY1P4-201ENST00000384595 115 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms