Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 BX276092.4-201ENST00000452056 248 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 CACYBPP2-201ENST00000453625 678 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.1□□□□□ -1.75
SALL3Q9BXA9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.1□□□□□ -1.75
SALL3Q9BXA9 RNU6-1045P-201ENST00000516321 107 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 Y_RNA.691-201ENST00000516611 103 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 AP000907.2-201ENST00000530827 353 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.1□□□□□ -1.75
SALL3Q9BXA9 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.1□□□□□ -1.75
SALL3Q9BXA9 PSMA3P-201ENST00000555485 635 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.1□□□□□ -1.75
SALL3Q9BXA9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.1□□□□□ -1.75
SALL3Q9BXA9 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.1□□□□□ -1.75
SALL3Q9BXA9 AC105224.1-201ENST00000587055 421 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 KC877982.1-201ENST00000602313 470 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 AC068790.3-201ENST00000602988 553 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 AC007179.3-201ENST00000604976 235 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 U3.45-201ENST00000607547 219 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 C2orf27A-204ENST00000623058 969 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.1□□□□□ -1.75
SALL3Q9BXA9 MIR1302-1-201ENST00000637932 143 ntBASIC4.1□□□□□ -1.75
SALL3Q9BXA9 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SALL3Q9BXA9 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SALL3Q9BXA9 NACAP2-201ENST00000318548 624 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 RNU6-996P-201ENST00000365438 107 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 Y_RNA.419-201ENST00000384041 102 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 Y_RNA.474-201ENST00000384341 102 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 MIR183-201ENST00000384958 110 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 RNU2-9P-201ENST00000410194 145 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 AL353678.1-201ENST00000422735 741 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SALL3Q9BXA9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.09□□□□□ -1.75
SALL3Q9BXA9 NIPA2P5-201ENST00000452282 464 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 SNRPGP5-201ENST00000456003 220 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 SNORA59A-201ENST00000459326 152 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 AP001992.1-205ENST00000462248 379 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 GMFBP1-201ENST00000467831 427 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 AC078785.3-201ENST00000476607 425 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 RN7SL293P-201ENST00000481765 281 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 RPS15AP36-201ENST00000492022 382 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.09□□□□□ -1.75
SALL3Q9BXA9 AC026427.2-201ENST00000506228 536 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 AC103851.1-201ENST00000506833 274 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.09□□□□□ -1.75
SALL3Q9BXA9 FCF1P8-201ENST00000510322 597 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.09□□□□□ -1.75
SALL3Q9BXA9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.09□□□□□ -1.75
SALL3Q9BXA9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.09□□□□□ -1.75
SALL3Q9BXA9 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.09□□□□□ -1.75
SALL3Q9BXA9 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.09□□□□□ -1.75
SALL3Q9BXA9 uc_338.12-201ENST00000616344 181 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 AC012314.7-201ENST00000619693 93 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 AC006065.5-201ENST00000623427 349 ntBASIC4.09□□□□□ -1.75
SALL3Q9BXA9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.09□□□□□ -1.75
SALL3Q9BXA9 AC011460.1-201ENST00000636268 1834 ntBASIC4.09□□□□□ -1.76
SALL3Q9BXA9 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SALL3Q9BXA9 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SALL3Q9BXA9 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SALL3Q9BXA9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SALL3Q9BXA9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.09□□□□□ -1.76
SALL3Q9BXA9 OR4G1P-203ENST00000641984 1631 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AC009902.3-201ENST00000606235 2172 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 RNA5SP258-201ENST00000362750 119 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 Y_RNA.67-201ENST00000362870 100 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 RNY4P16-201ENST00000364768 94 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 Y_RNA.315-201ENST00000365117 102 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 RNU4-48P-201ENST00000365559 182 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 RNU6-1207P-201ENST00000384343 107 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 MIR1-2-201ENST00000384961 85 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 MIR218-2-201ENST00000385006 110 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 U3.20-201ENST00000390909 217 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 MTCO3P12-201ENST00000416718 547 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AL353729.1-201ENST00000425044 720 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 RPL23AP30-201ENST00000432419 501 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AC236972.2-201ENST00000434979 310 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 USP9YP7-201ENST00000436723 430 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 UBE2V1P13-201ENST00000436983 439 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AC104073.1-201ENST00000451988 151 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 USP9YP32-201ENST00000452432 430 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 snoU13.8-201ENST00000458890 104 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AC233702.1-201ENST00000482905 502 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 HSPD1P15-201ENST00000505573 1122 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AC112206.3-201ENST00000514578 389 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 SNORD27.1-201ENST00000516319 72 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 SCARNA24.1-201ENST00000516465 137 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 Vault.1-201ENST00000516474 102 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 RNU6-1220P-201ENST00000517126 108 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.08□□□□□ -1.76
SALL3Q9BXA9 AC107953.1-201ENST00000522216 297 ntBASIC4.08□□□□□ -1.76
SALL3Q9BXA9 SUB1P1-201ENST00000524415 382 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms