Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
LRCH3Q96II8 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LRCH3Q96II8 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LRCH3Q96II8 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 RNU6-336P-201ENST00000364891 107 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 U8.7-201ENST00000364940 136 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 SNORA70.4-201ENST00000365509 134 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 RNU6-968P-201ENST00000384076 107 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 RNU1-74P-201ENST00000384108 171 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 MIR1302-4-201ENST00000408701 150 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 RNU6-1001P-201ENST00000411265 100 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 RPS12P23-201ENST00000419579 400 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 MRPS21P2-201ENST00000424704 264 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 KRT8P51-201ENST00000438938 274 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 AC112498.1-201ENST00000444401 332 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 AL353705.4-201ENST00000449661 238 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 RNU7-197P-201ENST00000458836 62 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 RN7SKP179-201ENST00000516126 217 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 RNU6-1095P-201ENST00000516148 108 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 AC084851.1-201ENST00000529105 249 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LRCH3Q96II8 AL391261.3-201ENST00000557194 520 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 AC106785.1-201ENST00000565935 262 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 MIR3145-201ENST00000580727 82 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 MIR3667-201ENST00000581025 74 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 AC005296.1-201ENST00000616145 209 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 AL591926.8-201ENST00000616876 211 ntBASIC5.78□□□□□ -1.48
LRCH3Q96II8 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LRCH3Q96II8 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LRCH3Q96II8 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LRCH3Q96II8 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.78□□□□□ -1.48
LRCH3Q96II8 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.48
LRCH3Q96II8 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LRCH3Q96II8 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
LRCH3Q96II8 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
LRCH3Q96II8 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LRCH3Q96II8 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRCH3Q96II8 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.77□□□□□ -1.49
LRCH3Q96II8 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRCH3Q96II8 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRCH3Q96II8 AC009812.4-201ENST00000569134 1805 ntBASIC5.77□□□□□ -1.49
LRCH3Q96II8 RNU5A-1-201ENST00000362698 116 ntBASIC5.77□□□□□ -1.49
LRCH3Q96II8 MIR153-2-201ENST00000385225 87 ntBASIC5.77□□□□□ -1.49
LRCH3Q96II8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.77□□□□□ -1.49
LRCH3Q96II8 Z82210.1-201ENST00000440037 231 ntBASIC5.77□□□□□ -1.49
LRCH3Q96II8 AL359073.1-201ENST00000448036 403 ntBASIC5.77□□□□□ -1.49
LRCH3Q96II8 AC005042.3-201ENST00000453230 174 ntBASIC5.77□□□□□ -1.49
LRCH3Q96II8 RPL23AP49-201ENST00000492925 468 ntBASIC5.77□□□□□ -1.49
LRCH3Q96II8 COX6B1P5-201ENST00000509843 249 ntBASIC5.77□□□□□ -1.49
LRCH3Q96II8 FCF1P8-201ENST00000510322 597 ntBASIC5.77□□□□□ -1.49
LRCH3Q96II8 AC006499.6-201ENST00000511169 607 ntBASIC5.77□□□□□ -1.49
LRCH3Q96II8 RNU5E-3P-201ENST00000515913 68 ntBASIC5.77□□□□□ -1.49
LRCH3Q96II8 RNU6-377P-201ENST00000515965 102 ntBASIC5.77□□□□□ -1.49
LRCH3Q96II8 Y_RNA.694-201ENST00000516677 117 ntBASIC5.77□□□□□ -1.49
LRCH3Q96II8 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.77□□□□□ -1.49
LRCH3Q96II8 AC022968.1-201ENST00000567372 442 ntBASIC5.77□□□□□ -1.49
LRCH3Q96II8 MIR4782-201ENST00000577987 79 ntBASIC5.77□□□□□ -1.49
LRCH3Q96II8 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
LRCH3Q96II8 AC107294.1-201ENST00000609524 467 ntBASIC5.77□□□□□ -1.49
LRCH3Q96II8 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.77□□□□□ -1.49
LRCH3Q96II8 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRCH3Q96II8 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRCH3Q96II8 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.77□□□□□ -1.49
LRCH3Q96II8 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRCH3Q96II8 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRCH3Q96II8 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRCH3Q96II8 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LRCH3Q96II8 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LRCH3Q96II8 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.77□□□□□ -1.49
LRCH3Q96II8 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
LRCH3Q96II8 AC139713.2-214ENST00000642059 1811 ntBASIC5.76□□□□□ -1.49
LRCH3Q96II8 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRCH3Q96II8 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRCH3Q96II8 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LRCH3Q96II8 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LRCH3Q96II8 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LRCH3Q96II8 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
LRCH3Q96II8 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
LRCH3Q96II8 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.76□□□□□ -1.49
LRCH3Q96II8 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
LRCH3Q96II8 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRCH3Q96II8 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.76□□□□□ -1.49
LRCH3Q96II8 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
LRCH3Q96II8 RNU6-376P-201ENST00000384731 106 ntBASIC5.76□□□□□ -1.49
LRCH3Q96II8 MIR600-201ENST00000385007 98 ntBASIC5.76□□□□□ -1.49
LRCH3Q96II8 MIR10A-201ENST00000385043 110 ntBASIC5.76□□□□□ -1.49
LRCH3Q96II8 RNU6-381P-201ENST00000391259 108 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms