Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RNU6-483P-201ENST00000384088 108 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 MIR634-201ENST00000385208 97 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 SNORA48.2-201ENST00000390926 124 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 RNU6-817P-201ENST00000391083 104 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 RAC1P3-201ENST00000416129 580 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 AC005300.1-201ENST00000428401 373 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 AL590383.1-201ENST00000428602 75 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 AC005326.1-201ENST00000429197 123 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 AC011742.1-201ENST00000431448 434 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 TAAR7P-201ENST00000436141 242 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 AC006512.1-201ENST00000468816 291 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 RN7SL807P-201ENST00000470923 297 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 RPS29P2-201ENST00000479278 136 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 RPL36AP51-201ENST00000487216 318 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 NDUFB4P9-201ENST00000511646 388 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 TTC39CP1-201ENST00000512513 755 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 RNU1-61P-201ENST00000516107 151 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 SNORA40.12-201ENST00000516329 111 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 AP001804.3-201ENST00000525146 880 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 OR5AL2P-201ENST00000532185 920 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 MIR3688-2-201ENST00000636963 87 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 MIR1321-201ENST00000637766 79 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
HMGB4Q8WW32 AC090740.1-201ENST00000623193 2262 ntBASIC3.59□□□□□ -1.84
HMGB4Q8WW32 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HMGB4Q8WW32 CEP170P1-201ENST00000502249 4587 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 RNU6-1090P-201ENST00000364065 94 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 MIR128-1-201ENST00000384921 82 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AL591416.1-201ENST00000404015 867 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 BX323014.1-201ENST00000412876 237 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 MTCYBP5-201ENST00000423752 1135 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 ELOCP14-201ENST00000428070 331 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 NDUFB4P6-201ENST00000436819 366 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 ELOCP7-201ENST00000439968 331 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AL356535.1-201ENST00000440335 398 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AC016691.1-201ENST00000441321 413 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AC009237.8-201ENST00000445492 379 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AC115115.1-201ENST00000449927 248 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 RNU7-63P-201ENST00000459054 62 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AC106782.4-201ENST00000568264 210 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AC008752.3-201ENST00000588113 712 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 MIR486-1-201ENST00000612171 68 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 MTND5P42-201ENST00000637720 498 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 API5P2-201ENST00000397055 1498 ntBASIC3.58□□□□□ -1.84
HMGB4Q8WW32 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMGB4Q8WW32 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 Y_RNA.256-201ENST00000364594 104 ntBASIC3.57□□□□□ -1.84
HMGB4Q8WW32 SNORD115-7-201ENST00000365306 82 ntBASIC3.57□□□□□ -1.84
HMGB4Q8WW32 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 RNU6-1197P-201ENST00000391183 107 ntBASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AL109913.1-201ENST00000421173 514 ntBASIC3.57□□□□□ -1.84
HMGB4Q8WW32 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 HMGB1P27-201ENST00000431429 603 ntBASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 RPS29P15-201ENST00000458329 171 ntBASIC3.57□□□□□ -1.84
HMGB4Q8WW32 RNU6-953P-201ENST00000459154 107 ntBASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AC105417.1-201ENST00000514691 285 ntBASIC3.57□□□□□ -1.84
HMGB4Q8WW32 RNU6-1281P-201ENST00000516223 105 ntBASIC3.57□□□□□ -1.84
HMGB4Q8WW32 RNU6-677P-201ENST00000516914 101 ntBASIC3.57□□□□□ -1.84
HMGB4Q8WW32 NARSP2-201ENST00000518524 679 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms