Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 MTATP6P7-201ENST00000453315 681 ntBASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 snoU109.2-201ENST00000459316 135 ntBASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 MED28P2-201ENST00000475771 317 ntBASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 RPL31P13-201ENST00000484151 370 ntBASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 RNU6-406P-201ENST00000516470 107 ntBASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 AP004607.1-201ENST00000524456 203 ntBASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 AC040958.1-201ENST00000561102 201 ntBASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 AC010900.2-201ENST00000604508 210 ntBASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 AC240442.1-201ENST00000616055 283 ntBASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 AL691477.1-201ENST00000624398 162 ntBASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 U6.99-201ENST00000637524 83 ntBASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 AC233981.2-201ENST00000611524 1614 ntBASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
DEPDC4Q8N2C3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 ADAM5-202ENST00000399789 1942 ntBASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 SNORD115-32-201ENST00000364079 82 ntBASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 MIR1178-201ENST00000408396 91 ntBASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 AL138752.1-201ENST00000452964 351 ntBASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 PRELID3BP1-201ENST00000457142 540 ntBASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 ATP5LP3-201ENST00000514223 304 ntBASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 AC006349.1-201ENST00000555526 235 ntBASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 AC108738.1-201ENST00000603703 237 ntBASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 SDR42E1P1-201ENST00000611327 477 ntBASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 RMST_6.1-201ENST00000611980 203 ntBASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 AC137590.2-201ENST00000619709 240 ntBASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 MIR6730-201ENST00000622213 67 ntBASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 AL450472.1-202ENST00000637286 180 ntBASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 AC022336.2-201ENST00000568966 2538 ntBASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
DEPDC4Q8N2C3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 SRRM1P3-201ENST00000426911 2678 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 RNU1-150P-201ENST00000362491 162 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 Y_RNA.143-201ENST00000363520 106 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 RNU6-17P-201ENST00000384245 107 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 RNU6-18P-201ENST00000384527 107 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 AL009179.1-201ENST00000406085 265 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 RNA5SP487-201ENST00000410186 122 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 RN7SKP114-201ENST00000410327 279 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 RN7SKP293-201ENST00000411389 296 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 EIF1AXP1-201ENST00000419267 435 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 AL445305.1-201ENST00000432577 575 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 SNORA43.2-201ENST00000516652 128 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 AC022404.1-201ENST00000555320 273 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 CYCSP39-201ENST00000565821 309 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 RN7SL787P-201ENST00000613000 284 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 AC004792.1-201ENST00000614523 137 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 RN7SL544P-201ENST00000617232 284 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 RN7SL763P-201ENST00000620922 284 ntBASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.05□□□□□ -1.6
DEPDC4Q8N2C3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms