Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 NDUFS5P1-201ENST00000405668 289 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NIPAL3Q6P499 RNU2-25P-201ENST00000411041 191 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.53□□□□□ -2
NIPAL3Q6P499 AC104651.1-201ENST00000427559 735 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 TIMM9P1-201ENST00000436122 256 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.53□□□□□ -2
NIPAL3Q6P499 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.53□□□□□ -2
NIPAL3Q6P499 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.53□□□□□ -2
NIPAL3Q6P499 MTCO1P42-201ENST00000457379 726 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.53□□□□□ -2
NIPAL3Q6P499 AC072039.1-201ENST00000477611 581 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 RPS27AP9-201ENST00000477681 438 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 MTND2P14-201ENST00000482139 351 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 AC011825.1-201ENST00000484967 388 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.53□□□□□ -2
NIPAL3Q6P499 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 RNA5SP471-201ENST00000516971 106 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.53□□□□□ -2
NIPAL3Q6P499 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.53□□□□□ -2
NIPAL3Q6P499 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.53□□□□□ -2
NIPAL3Q6P499 AP003461.1-201ENST00000528866 78 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 HPRT1P3-201ENST00000539521 576 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.53□□□□□ -2
NIPAL3Q6P499 NACAP3-201ENST00000552100 481 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 AL356432.3-201ENST00000568952 465 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.53□□□□□ -2
NIPAL3Q6P499 KC877982.1-201ENST00000602313 470 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 NRBF2P5-201ENST00000603087 788 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 AC008277.2-201ENST00000605196 797 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 AC005000.2-201ENST00000605468 310 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 AC107294.1-201ENST00000609524 467 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.53□□□□□ -2
NIPAL3Q6P499 AL359693.1-201ENST00000614959 2407 ntBASIC2.53□□□□□ -2
NIPAL3Q6P499 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.53□□□□□ -2
NIPAL3Q6P499 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
NIPAL3Q6P499 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 UBE2L2-201ENST00000254302 429 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 MIR26A1-201ENST00000362205 77 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 RNU6-660P-201ENST00000364566 109 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 RNU6-750P-201ENST00000390946 107 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 ELOCP17-201ENST00000414751 326 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AC098592.1-201ENST00000419352 333 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 BPY2DP-201ENST00000422208 265 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 HMGB1P9-201ENST00000429856 646 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 MED14P1-201ENST00000430517 648 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AL139132.1-201ENST00000431587 344 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 RPL39P40-201ENST00000445481 146 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 RPS27AP10-201ENST00000496103 208 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AC080014.1-201ENST00000496877 1201 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 RPF2P2-201ENST00000504693 896 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 SCARNA13-201ENST00000516672 275 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 ELOCP32-201ENST00000548625 324 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AC009097.3-201ENST00000563557 1018 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AC090616.3-201ENST00000582184 217 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AC024153.1-201ENST00000603103 365 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 CR381653.2-201ENST00000624041 768 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AC068057.2-201ENST00000624047 895 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AL137790.1-201ENST00000634283 177 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 MIR7515-201ENST00000637837 67 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 AC110491.1-201ENST00000562191 2010 ntBASIC2.52□□□□□ -2.01
NIPAL3Q6P499 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
NIPAL3Q6P499 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NIPAL3Q6P499 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
NIPAL3Q6P499 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
NIPAL3Q6P499 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
NIPAL3Q6P499 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
NIPAL3Q6P499 Y_RNA.46-201ENST00000362695 102 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 RNU6-461P-201ENST00000364195 107 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 RNU6-512P-201ENST00000364438 103 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 RN7SKP226-201ENST00000364912 300 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 RNU1-73P-201ENST00000383971 164 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 AL356057.2-201ENST00000403318 432 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 AL139397.2-201ENST00000404529 772 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 AL021407.1-201ENST00000404531 386 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 AL513475.1-201ENST00000406602 315 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 RPL19P1-201ENST00000411635 428 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 RPL26P27-201ENST00000414397 437 ntBASIC2.51□□□□□ -2.01
NIPAL3Q6P499 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.51□□□□□ -2.01
NIPAL3Q6P499 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms