Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 RSU1P2-202ENST00000437884 485 ntBASIC2.61□□□□□ -1.99
ATL3Q6DD88 AC025750.2-201ENST00000442609 450 ntBASIC2.61□□□□□ -1.99
ATL3Q6DD88 CBWD4P-201ENST00000445695 655 ntBASIC2.61□□□□□ -1.99
ATL3Q6DD88 ATG12P2-201ENST00000456830 416 ntBASIC2.61□□□□□ -1.99
ATL3Q6DD88 SNORD11.1-201ENST00000459482 85 ntBASIC2.61□□□□□ -1.99
ATL3Q6DD88 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 AC113155.1-201ENST00000511141 769 ntBASIC2.61□□□□□ -1.99
ATL3Q6DD88 RNU6-415P-201ENST00000516252 97 ntBASIC2.61□□□□□ -1.99
ATL3Q6DD88 RNU1-104P-201ENST00000517280 175 ntBASIC2.61□□□□□ -1.99
ATL3Q6DD88 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 PRELID2P1-201ENST00000552837 301 ntBASIC2.61□□□□□ -1.99
ATL3Q6DD88 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 TRAV28-201ENST00000557548 323 ntBASIC2.61□□□□□ -1.99
ATL3Q6DD88 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 RNU6-88P-201ENST00000606801 100 ntBASIC2.61□□□□□ -1.99
ATL3Q6DD88 AC046143.2-201ENST00000609789 160 ntBASIC2.61□□□□□ -1.99
ATL3Q6DD88 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 AC009831.4-201ENST00000620744 325 ntBASIC2.61□□□□□ -1.99
ATL3Q6DD88 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
ATL3Q6DD88 AC009902.3-201ENST00000606235 2172 ntBASIC2.61□□□□□ -1.99
ATL3Q6DD88 OR4G2P-202ENST00000641004 1759 ntBASIC2.61□□□□□ -1.99
ATL3Q6DD88 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
ATL3Q6DD88 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.61□□□□□ -1.99
ATL3Q6DD88 DDX10P1-201ENST00000448545 1933 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 MTND5P33-201ENST00000571250 1450 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.6□□□□□ -1.99
ATL3Q6DD88 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ATL3Q6DD88 RNU6-223P-201ENST00000362830 107 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 OR5H15-201ENST00000383696 930 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 MIR767-201ENST00000390228 109 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 TAS2R15P-201ENST00000390674 928 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 RPS4XP7-201ENST00000406274 780 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 HMGB1P49-201ENST00000418882 569 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 AC083875.1-201ENST00000419509 405 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 AC099548.1-201ENST00000421443 426 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.6□□□□□ -1.99
ATL3Q6DD88 BNIP3P2-201ENST00000441221 577 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.6□□□□□ -1.99
ATL3Q6DD88 AC093809.1-201ENST00000509155 340 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
ATL3Q6DD88 MRPS36P3-201ENST00000519284 130 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.6□□□□□ -1.99
ATL3Q6DD88 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.6□□□□□ -1.99
ATL3Q6DD88 AC023538.1-201ENST00000534576 736 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.6□□□□□ -1.99
ATL3Q6DD88 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.6□□□□□ -1.99
ATL3Q6DD88 AGGF1P5-201ENST00000567900 919 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.6□□□□□ -1.99
ATL3Q6DD88 AC103710.4-201ENST00000609301 899 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 AC005858.4-201ENST00000623191 700 ntBASIC2.6□□□□□ -1.99
ATL3Q6DD88 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.6□□□□□ -1.99
ATL3Q6DD88 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
ATL3Q6DD88 FAM133CP-201ENST00000332869 704 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 Y_RNA.111-201ENST00000363248 100 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 RNU4-28P-201ENST00000364739 141 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 SNORA67.1-201ENST00000364749 141 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 SET-203ENST00000372688 801 ntTSL 2 BASIC2.59□□□□□ -1.99
ATL3Q6DD88 RNU6-217P-201ENST00000384164 104 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 MIR325-201ENST00000385260 98 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 SNORA48.3-201ENST00000391081 134 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 MIR320C1-201ENST00000408566 88 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.59□□□□□ -1.99
ATL3Q6DD88 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.59□□□□□ -1.99
ATL3Q6DD88 AC098614.2-201ENST00000426040 255 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 AL049734.2-201ENST00000441066 616 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 Z73417.1-201ENST00000447373 778 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 AP1S2P1-201ENST00000457344 379 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 RPS20P22-201ENST00000473700 357 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 RPL31P41-201ENST00000477967 372 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 RNA5SP216-201ENST00000516111 123 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.59□□□□□ -1.99
ATL3Q6DD88 AC023050.2-201ENST00000544968 387 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.59□□□□□ -1.99
ATL3Q6DD88 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.59□□□□□ -1.99
ATL3Q6DD88 AC005951.2-201ENST00000576282 495 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 AL391001.1-201ENST00000602747 715 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 AC021171.1-201ENST00000603137 706 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.59□□□□□ -1.99
ATL3Q6DD88 AC097468.3-201ENST00000607956 456 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 AC093838.1-201ENST00000613014 469 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 UCA1.1-201ENST00000620952 75 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 AC006386.2-201ENST00000624491 75 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 AC012005.1-201ENST00000624575 75 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 AL160394.1-201ENST00000624765 724 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 AC019226.1-201ENST00000625666 515 ntBASIC2.59□□□□□ -1.99
ATL3Q6DD88 AC093591.3-201ENST00000634516 308 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms