Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 TRAV32-201ENST00000553993 340 ntBASIC5.87□□□□□ -1.47
RC3H1Q5TC82 AC034105.4-201ENST00000568304 277 ntBASIC5.87□□□□□ -1.47
RC3H1Q5TC82 MIR5696-201ENST00000578474 85 ntBASIC5.87□□□□□ -1.47
RC3H1Q5TC82 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.87□□□□□ -1.47
RC3H1Q5TC82 AC091979.2-201ENST00000607514 214 ntBASIC5.87□□□□□ -1.47
RC3H1Q5TC82 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 AC034102.8-201ENST00000615146 484 ntBASIC5.87□□□□□ -1.47
RC3H1Q5TC82 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 Y_RNA.44-201ENST00000362676 108 ntBASIC5.86□□□□□ -1.47
RC3H1Q5TC82 MIR23B-201ENST00000384832 97 ntBASIC5.86□□□□□ -1.47
RC3H1Q5TC82 U3.29-201ENST00000391296 212 ntBASIC5.86□□□□□ -1.47
RC3H1Q5TC82 RPL23AP26-201ENST00000412728 464 ntBASIC5.86□□□□□ -1.47
RC3H1Q5TC82 TMEM167AP1-201ENST00000423409 219 ntBASIC5.86□□□□□ -1.47
RC3H1Q5TC82 AC087650.1-201ENST00000431445 468 ntBASIC5.86□□□□□ -1.47
RC3H1Q5TC82 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 AL445433.1-201ENST00000457507 257 ntBASIC5.86□□□□□ -1.47
RC3H1Q5TC82 AC053481.1-201ENST00000467217 306 ntBASIC5.86□□□□□ -1.47
RC3H1Q5TC82 UQCRHP4-201ENST00000471686 272 ntBASIC5.86□□□□□ -1.47
RC3H1Q5TC82 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 AC087369.1-201ENST00000520775 996 ntBASIC5.86□□□□□ -1.47
RC3H1Q5TC82 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 IPO5P1-202ENST00000600039 287 ntBASIC5.86□□□□□ -1.47
RC3H1Q5TC82 AL031601.2-202ENST00000622650 282 ntBASIC5.86□□□□□ -1.47
RC3H1Q5TC82 AC034229.5-201ENST00000624258 185 ntBASIC5.86□□□□□ -1.47
RC3H1Q5TC82 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RC3H1Q5TC82 AC007785.2-201ENST00000598627 1916 ntBASIC5.86□□□□□ -1.47
RC3H1Q5TC82 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 SNORD113-8-201ENST00000363497 74 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 RNU6-1035P-201ENST00000384477 107 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 RNU1-13P-201ENST00000384499 162 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 RNU11-4P-201ENST00000391149 133 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 RNA5SP317-201ENST00000410176 116 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 RNU6-1135P-201ENST00000411083 103 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 RNA5SP311-201ENST00000411290 116 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 RPL21P90-201ENST00000415692 466 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 AC011998.1-201ENST00000433403 117 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 PRDX3P3-201ENST00000447765 522 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 AC010655.1-201ENST00000449336 292 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 RNU6-1218P-201ENST00000458990 108 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 AC133134.1-201ENST00000466800 359 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 AC020593.1-201ENST00000507399 299 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 SNORD116-28-201ENST00000516123 91 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 RNU6-496P-201ENST00000516145 99 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 RNA5SP315-201ENST00000516340 116 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 RN7SKP60-201ENST00000516985 239 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 RNA5SP312-201ENST00000517068 116 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 MIR5692A1-201ENST00000580523 69 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 AC006272.2-201ENST00000594725 163 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 AC025588.3-201ENST00000604182 274 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 Y_RNA.772-201ENST00000606692 102 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 AC108706.1-201ENST00000611053 297 ntBASIC5.85□□□□□ -1.47
RC3H1Q5TC82 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.85□□□□□ -1.47
RC3H1Q5TC82 AL365222.1-201ENST00000614661 98 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms