Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 RNU6-1155P-201ENST00000363554 107 ntBASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 Y_RNA.376-201ENST00000365638 108 ntBASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 MIR135A2-201ENST00000384854 100 ntBASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 MIR625-201ENST00000385047 85 ntBASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 CTSL3P-202ENST00000412179 788 ntBASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 RPS15AP6-201ENST00000420703 385 ntBASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 PPP1R11P2-201ENST00000423543 382 ntBASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 HMGB1P27-201ENST00000431429 603 ntBASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 AC090774.1-201ENST00000435925 246 ntBASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 AL691482.1-201ENST00000453255 87 ntBASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 AP000942.1-201ENST00000463969 747 ntBASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 ACA59.1-201ENST00000515966 143 ntBASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 SNORA40.15-201ENST00000516884 107 ntBASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 AC144568.1-201ENST00000520139 137 ntBASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 HSPE1P20-201ENST00000538133 289 ntBASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 SMG1P6-201ENST00000532337 2930 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 Y_RNA.60-201ENST00000362831 98 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 Y_RNA.222-201ENST00000364264 102 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 SNORA5.1-201ENST00000384275 131 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 Y_RNA.483-201ENST00000384380 101 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 AL030996.1-201ENST00000411430 235 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 BX276092.6-201ENST00000430476 250 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 AC099670.2-201ENST00000435130 321 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 RPL23AP52-201ENST00000439311 478 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 CHEK2P4-201ENST00000450340 246 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 BX276092.8-201ENST00000455722 250 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 RN7SL691P-201ENST00000494487 301 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 RPS24P16-201ENST00000497294 392 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 RN7SL558P-201ENST00000497468 299 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 AC093249.4-201ENST00000564755 259 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 MIR4273-201ENST00000582824 84 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 HMGB2P1-201ENST00000591146 634 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 AL512605.2-201ENST00000592972 256 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 AC108738.1-201ENST00000603703 237 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 AL031601.2-202ENST00000622650 282 ntBASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL13A1Q5TAT6 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 RNY1P16-201ENST00000363063 111 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 RNU6-770P-201ENST00000363929 105 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 RNU6-1303P-201ENST00000364841 107 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 RNA5SP187-201ENST00000384400 119 ntBASIC5.1□□□□□ -1.59
COL13A1Q5TAT6 RNU6-790P-201ENST00000384479 105 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms