Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDC42EP1Q00587 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDC42EP1Q00587 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDC42EP1Q00587 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.03□□□□□ -1.76
CDC42EP1Q00587 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 RNU6-288P-201ENST00000363690 104 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 RNU6-694P-201ENST00000364071 147 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 Y_RNA.356-201ENST00000365475 113 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 RN7SKP140-201ENST00000411196 284 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 RNA5SP111-201ENST00000411386 101 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 BX323014.1-201ENST00000412876 237 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AC006946.1-201ENST00000429106 328 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 HMGB1P27-201ENST00000431429 603 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AL353748.1-201ENST00000440753 474 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AL590639.1-201ENST00000456484 337 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AC007547.1-201ENST00000462177 490 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AC078817.1-201ENST00000492623 435 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AC078918.1-201ENST00000498515 228 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 RNA5SP208-201ENST00000516156 78 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 RNU6-685P-201ENST00000517088 95 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 RNU6-1073P-201ENST00000517182 106 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AC107953.1-201ENST00000522216 297 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AC174048.1-201ENST00000603389 144 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AC013553.2-201ENST00000604244 589 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AL357559.1-201ENST00000622228 274 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 AC005858.4-201ENST00000623191 700 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDC42EP1Q00587 SDAD1P2-201ENST00000441308 2028 ntBASIC4.02□□□□□ -1.77
CDC42EP1Q00587 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 DEFB108F-201ENST00000344638 222 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 RNA5SP72-201ENST00000364442 117 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AL592114.1-201ENST00000403842 483 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AC092809.3-201ENST00000415453 231 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 ARL5AP1-201ENST00000418991 388 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AL451054.2-201ENST00000420896 202 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AL356535.1-201ENST00000440335 398 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 RNU6-953P-201ENST00000459154 107 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 RN7SL293P-201ENST00000481765 281 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AC069499.1-201ENST00000489433 509 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 Y_RNA.665-201ENST00000516177 98 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 RNU6-1038P-201ENST00000516516 104 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AL121576.1-201ENST00000556055 276 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 MED28P6-201ENST00000558776 231 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AL138889.2-201ENST00000603883 242 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AL359547.2-201ENST00000615810 418 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 AP003355.3-201ENST00000623465 114 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 OR4G2P-202ENST00000641004 1759 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDC42EP1Q00587 MTND4P35-201ENST00000604257 1375 ntBASIC4.01□□□□□ -1.77
CDC42EP1Q00587 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
CDC42EP1Q00587 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4□□□□□ -1.77
CDC42EP1Q00587 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4□□□□□ -1.77
CDC42EP1Q00587 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CDC42EP1Q00587 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms