Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 EDDM3CP-201ENST00000415977 425 ntBASIC6.15□□□□□ -1.42
NUBP1P53384 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC6.15□□□□□ -1.42
NUBP1P53384 ATP6V0E1P4-201ENST00000427294 242 ntBASIC6.15□□□□□ -1.42
NUBP1P53384 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC6.15□□□□□ -1.42
NUBP1P53384 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC6.15□□□□□ -1.42
NUBP1P53384 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC6.15□□□□□ -1.42
NUBP1P53384 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.15□□□□□ -1.42
NUBP1P53384 RN7SL172P-201ENST00000460535 303 ntBASIC6.15□□□□□ -1.42
NUBP1P53384 RN7SKP66-201ENST00000516681 231 ntBASIC6.15□□□□□ -1.42
NUBP1P53384 Y_RNA.710-201ENST00000516975 110 ntBASIC6.15□□□□□ -1.42
NUBP1P53384 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC6.15□□□□□ -1.42
NUBP1P53384 AL451007.1-201ENST00000595491 289 ntBASIC6.15□□□□□ -1.42
NUBP1P53384 RN7SL544P-201ENST00000617232 284 ntBASIC6.15□□□□□ -1.42
NUBP1P53384 AC005562.2-201ENST00000618264 111 ntBASIC6.15□□□□□ -1.42
NUBP1P53384 RN7SL763P-201ENST00000620922 284 ntBASIC6.15□□□□□ -1.42
NUBP1P53384 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC6.15□□□□□ -1.42
NUBP1P53384 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NUBP1P53384 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
NUBP1P53384 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.15□□□□□ -1.43
NUBP1P53384 AC139713.2-214ENST00000642059 1811 ntBASIC6.15□□□□□ -1.43
NUBP1P53384 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.15□□□□□ -1.43
NUBP1P53384 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NUBP1P53384 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.15□□□□□ -1.43
NUBP1P53384 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
NUBP1P53384 AC069528.2-201ENST00000624849 1991 ntBASIC6.15□□□□□ -1.43
NUBP1P53384 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUBP1P53384 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUBP1P53384 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.14□□□□□ -1.43
NUBP1P53384 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUBP1P53384 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUBP1P53384 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
NUBP1P53384 AL513302.2-201ENST00000562313 1842 ntBASIC6.14□□□□□ -1.43
NUBP1P53384 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NUBP1P53384 RNU6-978P-201ENST00000364371 103 ntBASIC6.14□□□□□ -1.43
NUBP1P53384 Y_RNA.432-201ENST00000384087 111 ntBASIC6.14□□□□□ -1.43
NUBP1P53384 RNU6-622P-201ENST00000384272 103 ntBASIC6.14□□□□□ -1.43
NUBP1P53384 Y_RNA.587-201ENST00000391210 103 ntBASIC6.14□□□□□ -1.43
NUBP1P53384 RN7SKP213-201ENST00000410746 298 ntBASIC6.14□□□□□ -1.43
NUBP1P53384 RPL35AP3-201ENST00000414680 288 ntBASIC6.14□□□□□ -1.43
NUBP1P53384 SRSF1P1-201ENST00000424058 520 ntBASIC6.14□□□□□ -1.43
NUBP1P53384 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC6.14□□□□□ -1.43
NUBP1P53384 AL139148.1-201ENST00000427122 680 ntBASIC6.14□□□□□ -1.43
NUBP1P53384 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
NUBP1P53384 IFNWP4-201ENST00000453148 294 ntBASIC6.14□□□□□ -1.43
NUBP1P53384 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.14□□□□□ -1.43
NUBP1P53384 SRIP1-201ENST00000489235 288 ntBASIC6.14□□□□□ -1.43
NUBP1P53384 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.14□□□□□ -1.43
NUBP1P53384 AL160236.1-201ENST00000556317 195 ntBASIC6.14□□□□□ -1.43
NUBP1P53384 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.14□□□□□ -1.43
NUBP1P53384 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.14□□□□□ -1.43
NUBP1P53384 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.14□□□□□ -1.43
NUBP1P53384 AL137843.1-201ENST00000605078 385 ntBASIC6.14□□□□□ -1.43
NUBP1P53384 AC018692.3-201ENST00000623929 123 ntBASIC6.14□□□□□ -1.43
NUBP1P53384 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC6.14□□□□□ -1.43
NUBP1P53384 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC6.14□□□□□ -1.43
NUBP1P53384 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.14□□□□□ -1.43
NUBP1P53384 AL596211.1-201ENST00000569873 2277 ntBASIC6.14□□□□□ -1.43
NUBP1P53384 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NUBP1P53384 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
NUBP1P53384 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NUBP1P53384 AC068769.1-201ENST00000474767 2426 ntBASIC6.14□□□□□ -1.43
NUBP1P53384 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NUBP1P53384 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 MTND5P18-201ENST00000445624 1801 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NUBP1P53384 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NUBP1P53384 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUBP1P53384 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUBP1P53384 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
NUBP1P53384 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUBP1P53384 RNU6-640P-201ENST00000363693 105 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 Y_RNA.281-201ENST00000364774 94 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 RNU6-1131P-201ENST00000364955 107 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 MIR518C-201ENST00000384822 101 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 MIR199B-201ENST00000384849 110 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 RNU6-1275P-201ENST00000391087 107 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 RNU6-1197P-201ENST00000391183 107 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 AL645733.1-201ENST00000402250 217 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 AL591419.1-201ENST00000427423 339 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 REG1CP-206ENST00000447469 496 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 FRG2FP-204ENST00000453982 852 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 RN7SL583P-201ENST00000475692 287 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 HMGB1P22-201ENST00000505315 124 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 RNU6-762P-201ENST00000517107 102 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 RN7SL708P-201ENST00000580952 299 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 AC097467.4-201ENST00000605504 141 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 AP001318.4-201ENST00000616637 121 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 AC131009.3-201ENST00000621809 287 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
NUBP1P53384 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NUBP1P53384 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.13□□□□□ -1.43
NUBP1P53384 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
NUBP1P53384 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
NUBP1P53384 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.13□□□□□ -1.43
NUBP1P53384 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.13□□□□□ -1.43
NUBP1P53384 ZNF137P-201ENST00000456718 1920 ntBASIC6.13□□□□□ -1.43
NUBP1P53384 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
NUBP1P53384 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NUBP1P53384 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
NUBP1P53384 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms