Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC024082.2-201ENST00000434771 238 ntBASIC1.62□□□□□ -2.15
NUP98P52948 AC245517.4-201ENST00000448601 281 ntBASIC1.62□□□□□ -2.15
NUP98P52948 AC022634.1-201ENST00000520765 532 ntBASIC1.62□□□□□ -2.15
NUP98P52948 CYCSP26-201ENST00000534107 320 ntBASIC1.62□□□□□ -2.15
NUP98P52948 MTCYBP27-201ENST00000555160 670 ntBASIC1.62□□□□□ -2.15
NUP98P52948 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.62□□□□□ -2.15
NUP98P52948 MIR4452-201ENST00000583004 71 ntBASIC1.62□□□□□ -2.15
NUP98P52948 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.62□□□□□ -2.15
NUP98P52948 AC105224.1-201ENST00000587055 421 ntBASIC1.62□□□□□ -2.15
NUP98P52948 AC021749.1-201ENST00000604322 607 ntBASIC1.62□□□□□ -2.15
NUP98P52948 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
NUP98P52948 RNU6-40P-201ENST00000384254 107 ntBASIC1.61□□□□□ -2.15
NUP98P52948 AL355497.1-201ENST00000406262 551 ntBASIC1.61□□□□□ -2.15
NUP98P52948 AL512637.2-201ENST00000431287 1256 ntBASIC1.61□□□□□ -2.15
NUP98P52948 ZNF965P-201ENST00000432501 817 ntBASIC1.61□□□□□ -2.15
NUP98P52948 MTCO3P2-201ENST00000457365 171 ntBASIC1.61□□□□□ -2.15
NUP98P52948 AC068781.1-201ENST00000488231 618 ntBASIC1.61□□□□□ -2.15
NUP98P52948 AC034222.1-201ENST00000494052 532 ntBASIC1.61□□□□□ -2.15
NUP98P52948 Y_RNA.670-201ENST00000516255 105 ntBASIC1.61□□□□□ -2.15
NUP98P52948 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.61□□□□□ -2.15
NUP98P52948 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.61□□□□□ -2.15
NUP98P52948 OR4R1P-201ENST00000529879 463 ntBASIC1.61□□□□□ -2.15
NUP98P52948 HMGB1P14-201ENST00000557424 591 ntBASIC1.61□□□□□ -2.15
NUP98P52948 AC025918.2-201ENST00000558683 763 ntBASIC1.61□□□□□ -2.15
NUP98P52948 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.61□□□□□ -2.15
NUP98P52948 AC068338.1-201ENST00000565567 176 ntBASIC1.61□□□□□ -2.15
NUP98P52948 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.61□□□□□ -2.15
NUP98P52948 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.61□□□□□ -2.15
NUP98P52948 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.61□□□□□ -2.15
NUP98P52948 AC025263.3-201ENST00000622965 1396 ntBASIC1.61□□□□□ -2.15
NUP98P52948 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
NUP98P52948 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
NUP98P52948 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.61□□□□□ -2.15
NUP98P52948 RNU6-921P-201ENST00000384361 107 ntBASIC1.61□□□□□ -2.15
NUP98P52948 MIR17-201ENST00000385012 84 ntBASIC1.61□□□□□ -2.15
NUP98P52948 FO393414.1-201ENST00000428697 1184 ntBASIC1.61□□□□□ -2.15
NUP98P52948 AL590233.1-201ENST00000430017 456 ntBASIC1.61□□□□□ -2.15
NUP98P52948 DNAJC19P4-201ENST00000440115 345 ntBASIC1.61□□□□□ -2.15
NUP98P52948 TRGVB-201ENST00000453257 471 ntBASIC1.61□□□□□ -2.15
NUP98P52948 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.61□□□□□ -2.15
NUP98P52948 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.61□□□□□ -2.15
NUP98P52948 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.61□□□□□ -2.15
NUP98P52948 RNU6-798P-201ENST00000516912 103 ntBASIC1.61□□□□□ -2.15
NUP98P52948 AC087808.1-201ENST00000520501 361 ntBASIC1.61□□□□□ -2.15
NUP98P52948 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.61□□□□□ -2.15
NUP98P52948 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.61□□□□□ -2.15
NUP98P52948 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.61□□□□□ -2.15
NUP98P52948 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
NUP98P52948 HMGB1P24-202ENST00000615653 685 ntBASIC1.61□□□□□ -2.15
NUP98P52948 MTCO1P18-201ENST00000455518 1419 ntBASIC1.61□□□□□ -2.15
NUP98P52948 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
NUP98P52948 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
NUP98P52948 RNU6-251P-201ENST00000363235 104 ntBASIC1.6□□□□□ -2.15
NUP98P52948 SNORA27.3-201ENST00000364937 134 ntBASIC1.6□□□□□ -2.15
NUP98P52948 SNORD51-201ENST00000384320 80 ntBASIC1.6□□□□□ -2.15
NUP98P52948 RPS12P24-201ENST00000412619 387 ntBASIC1.6□□□□□ -2.15
NUP98P52948 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.6□□□□□ -2.15
NUP98P52948 AL356867.1-201ENST00000429623 299 ntBASIC1.6□□□□□ -2.15
NUP98P52948 RPS6P15-201ENST00000431996 751 ntBASIC1.6□□□□□ -2.15
NUP98P52948 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.6□□□□□ -2.15
NUP98P52948 OSTCP8-201ENST00000445117 448 ntBASIC1.6□□□□□ -2.15
NUP98P52948 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.6□□□□□ -2.15
NUP98P52948 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.6□□□□□ -2.15
NUP98P52948 AC008676.3-201ENST00000521237 435 ntBASIC1.6□□□□□ -2.15
NUP98P52948 AC124293.1-201ENST00000530034 493 ntBASIC1.6□□□□□ -2.15
NUP98P52948 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.6□□□□□ -2.15
NUP98P52948 LSM6P2-201ENST00000552208 177 ntBASIC1.6□□□□□ -2.15
NUP98P52948 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.6□□□□□ -2.15
NUP98P52948 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.6□□□□□ -2.15
NUP98P52948 MIR7515-201ENST00000637837 67 ntBASIC1.6□□□□□ -2.15
NUP98P52948 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
NUP98P52948 RNU6-252P-201ENST00000363232 107 ntBASIC1.59□□□□□ -2.15
NUP98P52948 RNU6-920P-201ENST00000410926 92 ntBASIC1.59□□□□□ -2.15
NUP98P52948 Z75741.2-201ENST00000417272 1167 ntBASIC1.59□□□□□ -2.15
NUP98P52948 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.59□□□□□ -2.15
NUP98P52948 AL714022.1-201ENST00000439897 151 ntBASIC1.59□□□□□ -2.15
NUP98P52948 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.59□□□□□ -2.15
NUP98P52948 PABPC1P3-201ENST00000469174 459 ntBASIC1.59□□□□□ -2.15
NUP98P52948 AC116337.2-201ENST00000477662 156 ntBASIC1.59□□□□□ -2.15
NUP98P52948 AC004223.1-201ENST00000479840 271 ntBASIC1.59□□□□□ -2.15
NUP98P52948 AC023790.1-201ENST00000482174 347 ntBASIC1.59□□□□□ -2.15
NUP98P52948 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.59□□□□□ -2.15
NUP98P52948 AC112503.2-201ENST00000609005 552 ntBASIC1.59□□□□□ -2.15
NUP98P52948 AP000254.1-201ENST00000609934 520 ntBASIC1.59□□□□□ -2.15
NUP98P52948 AC009318.4-201ENST00000620496 486 ntBASIC1.59□□□□□ -2.15
NUP98P52948 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.59□□□□□ -2.15
NUP98P52948 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.15
NUP98P52948 AL596028.1-201ENST00000326971 197 ntBASIC1.59□□□□□ -2.16
NUP98P52948 RNU1-22P-201ENST00000363334 158 ntBASIC1.59□□□□□ -2.16
NUP98P52948 U3.20-201ENST00000390909 217 ntBASIC1.59□□□□□ -2.16
NUP98P52948 AL121978.1-201ENST00000402778 359 ntBASIC1.59□□□□□ -2.16
NUP98P52948 RNU2-40P-201ENST00000410833 196 ntBASIC1.59□□□□□ -2.16
NUP98P52948 AC074117.2-201ENST00000417130 397 ntBASIC1.59□□□□□ -2.16
NUP98P52948 MICF-203ENST00000432679 129 ntBASIC1.59□□□□□ -2.16
NUP98P52948 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.59□□□□□ -2.16
NUP98P52948 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.59□□□□□ -2.16
NUP98P52948 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.59□□□□□ -2.16
NUP98P52948 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.59□□□□□ -2.16
NUP98P52948 AC147055.4-201ENST00000504399 745 ntBASIC1.59□□□□□ -2.16
NUP98P52948 SCARNA3-201ENST00000517097 143 ntBASIC1.59□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms