Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC007998.5-201ENST00000622938 237 ntBASIC3.36□□□□□ -1.87
CENPAP49450 AC025034.2-201ENST00000623264 286 ntBASIC3.36□□□□□ -1.87
CENPAP49450 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.36□□□□□ -1.87
CENPAP49450 MIR1321-201ENST00000637766 79 ntBASIC3.36□□□□□ -1.87
CENPAP49450 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.36□□□□□ -1.87
CENPAP49450 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.36□□□□□ -1.87
CENPAP49450 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CENPAP49450 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.36□□□□□ -1.87
CENPAP49450 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CENPAP49450 MTND5P7-201ENST00000413558 1798 ntBASIC3.35□□□□□ -1.87
CENPAP49450 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.35□□□□□ -1.87
CENPAP49450 AC093908.1-201ENST00000623125 8092 ntBASIC3.35□□□□□ -1.87
CENPAP49450 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CENPAP49450 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CENPAP49450 MTND5P17-201ENST00000418405 1603 ntBASIC3.35□□□□□ -1.87
CENPAP49450 MIR372-201ENST00000362225 67 ntBASIC3.35□□□□□ -1.87
CENPAP49450 RNU6-1158P-201ENST00000391167 107 ntBASIC3.35□□□□□ -1.87
CENPAP49450 MIR1277-201ENST00000408536 78 ntBASIC3.35□□□□□ -1.87
CENPAP49450 RN7SKP53-201ENST00000411337 315 ntBASIC3.35□□□□□ -1.87
CENPAP49450 AL513331.1-201ENST00000411908 397 ntBASIC3.35□□□□□ -1.87
CENPAP49450 BTF3L4P3-201ENST00000418879 476 ntBASIC3.35□□□□□ -1.87
CENPAP49450 RPL17P36-201ENST00000420302 549 ntBASIC3.35□□□□□ -1.87
CENPAP49450 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.35□□□□□ -1.87
CENPAP49450 MTND4P25-201ENST00000441039 533 ntBASIC3.35□□□□□ -1.87
CENPAP49450 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.35□□□□□ -1.87
CENPAP49450 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.35□□□□□ -1.87
CENPAP49450 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.35□□□□□ -1.87
CENPAP49450 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.35□□□□□ -1.87
CENPAP49450 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.35□□□□□ -1.87
CENPAP49450 RNU6-420P-201ENST00000458780 107 ntBASIC3.35□□□□□ -1.87
CENPAP49450 MTCO3P38-201ENST00000468910 766 ntBASIC3.35□□□□□ -1.87
CENPAP49450 RPS23P3-201ENST00000470993 430 ntBASIC3.35□□□□□ -1.87
CENPAP49450 AC083798.1-201ENST00000472671 131 ntBASIC3.35□□□□□ -1.87
CENPAP49450 RN7SL323P-201ENST00000494712 295 ntBASIC3.35□□□□□ -1.87
CENPAP49450 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.35□□□□□ -1.87
CENPAP49450 RNU6-1256P-201ENST00000516539 103 ntBASIC3.35□□□□□ -1.87
CENPAP49450 RNU6-352P-201ENST00000516908 107 ntBASIC3.35□□□□□ -1.87
CENPAP49450 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.35□□□□□ -1.87
CENPAP49450 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.35□□□□□ -1.87
CENPAP49450 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.35□□□□□ -1.87
CENPAP49450 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.35□□□□□ -1.87
CENPAP49450 AC103843.2-201ENST00000530523 682 ntBASIC3.35□□□□□ -1.87
CENPAP49450 OR5B19P-201ENST00000531766 928 ntBASIC3.35□□□□□ -1.87
CENPAP49450 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.35□□□□□ -1.87
CENPAP49450 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.35□□□□□ -1.87
CENPAP49450 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.35□□□□□ -1.87
CENPAP49450 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.35□□□□□ -1.87
CENPAP49450 HSPE1P5-201ENST00000561489 272 ntBASIC3.35□□□□□ -1.87
CENPAP49450 AC068135.2-201ENST00000569293 1028 ntBASIC3.35□□□□□ -1.87
CENPAP49450 MTCO3P24-201ENST00000572729 782 ntBASIC3.35□□□□□ -1.87
CENPAP49450 AC008752.3-201ENST00000588113 712 ntBASIC3.35□□□□□ -1.87
CENPAP49450 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.35□□□□□ -1.87
CENPAP49450 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.35□□□□□ -1.87
CENPAP49450 AC010591.1-201ENST00000603941 649 ntBASIC3.35□□□□□ -1.87
CENPAP49450 AP000907.4-201ENST00000604143 237 ntBASIC3.35□□□□□ -1.87
CENPAP49450 AL158032.1-201ENST00000605401 106 ntBASIC3.35□□□□□ -1.87
CENPAP49450 RMST_8.1-201ENST00000610287 165 ntBASIC3.35□□□□□ -1.87
CENPAP49450 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CENPAP49450 AP003122.6-201ENST00000623831 495 ntBASIC3.35□□□□□ -1.87
CENPAP49450 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.35□□□□□ -1.87
CENPAP49450 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.35□□□□□ -1.87
CENPAP49450 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CENPAP49450 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.35□□□□□ -1.87
CENPAP49450 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CENPAP49450 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CENPAP49450 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CENPAP49450 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CENPAP49450 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CENPAP49450 RNU6-288P-201ENST00000363690 104 ntBASIC3.34□□□□□ -1.87
CENPAP49450 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.34□□□□□ -1.87
CENPAP49450 AL391417.1-201ENST00000404100 426 ntBASIC3.34□□□□□ -1.87
CENPAP49450 AL590383.1-201ENST00000428602 75 ntBASIC3.34□□□□□ -1.87
CENPAP49450 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.34□□□□□ -1.87
CENPAP49450 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.34□□□□□ -1.87
CENPAP49450 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.34□□□□□ -1.87
CENPAP49450 AL356010.1-201ENST00000456364 102 ntBASIC3.34□□□□□ -1.87
CENPAP49450 RNU6-953P-201ENST00000459154 107 ntBASIC3.34□□□□□ -1.87
CENPAP49450 RPL37P6-201ENST00000460682 294 ntBASIC3.34□□□□□ -1.87
CENPAP49450 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.34□□□□□ -1.87
CENPAP49450 AC109927.2-201ENST00000506416 303 ntBASIC3.34□□□□□ -1.87
CENPAP49450 SNORA31.1-201ENST00000515993 133 ntBASIC3.34□□□□□ -1.87
CENPAP49450 SNORA31.5-201ENST00000516190 133 ntBASIC3.34□□□□□ -1.87
CENPAP49450 SCARNA15.2-201ENST00000516409 127 ntBASIC3.34□□□□□ -1.87
CENPAP49450 RN7SKP60-201ENST00000516985 239 ntBASIC3.34□□□□□ -1.87
CENPAP49450 RNA5SP503-201ENST00000517047 117 ntBASIC3.34□□□□□ -1.87
CENPAP49450 MIR2116-201ENST00000517221 80 ntBASIC3.34□□□□□ -1.87
CENPAP49450 SNORA31.26-201ENST00000517250 137 ntBASIC3.34□□□□□ -1.87
CENPAP49450 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.34□□□□□ -1.87
CENPAP49450 OR5B10P-201ENST00000532869 642 ntBASIC3.34□□□□□ -1.87
CENPAP49450 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CENPAP49450 CYCSP30-201ENST00000546447 172 ntBASIC3.34□□□□□ -1.87
CENPAP49450 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.34□□□□□ -1.87
CENPAP49450 AC234778.2-201ENST00000566241 354 ntBASIC3.34□□□□□ -1.87
CENPAP49450 SNORA59B-202ENST00000578183 701 ntBASIC3.34□□□□□ -1.87
CENPAP49450 AC006504.3-201ENST00000586818 523 ntBASIC3.34□□□□□ -1.87
CENPAP49450 AL162413.1-201ENST00000603198 110 ntBASIC3.34□□□□□ -1.87
CENPAP49450 AC104763.2-201ENST00000604179 382 ntBASIC3.34□□□□□ -1.87
CENPAP49450 SNORA62.6-201ENST00000606322 83 ntBASIC3.34□□□□□ -1.87
CENPAP49450 AL356321.1-201ENST00000621360 228 ntBASIC3.34□□□□□ -1.87
CENPAP49450 AL732372.2-225ENST00000642124 456 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms