Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.39□□□□□ -1.87
SOX2P48431 AC093840.1-201ENST00000511599 336 ntBASIC3.39□□□□□ -1.87
SOX2P48431 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.39□□□□□ -1.87
SOX2P48431 SCARNA15.2-201ENST00000516409 127 ntBASIC3.39□□□□□ -1.87
SOX2P48431 RN7SKP83-201ENST00000516512 178 ntBASIC3.39□□□□□ -1.87
SOX2P48431 RNA5SP179-201ENST00000517284 121 ntBASIC3.39□□□□□ -1.87
SOX2P48431 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.39□□□□□ -1.87
SOX2P48431 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.39□□□□□ -1.87
SOX2P48431 CYCSP29-201ENST00000533731 318 ntBASIC3.39□□□□□ -1.87
SOX2P48431 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.39□□□□□ -1.87
SOX2P48431 AC011611.1-201ENST00000552179 197 ntBASIC3.39□□□□□ -1.87
SOX2P48431 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.39□□□□□ -1.87
SOX2P48431 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.39□□□□□ -1.87
SOX2P48431 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.39□□□□□ -1.87
SOX2P48431 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.39□□□□□ -1.87
SOX2P48431 AC005498.1-201ENST00000592125 465 ntBASIC3.39□□□□□ -1.87
SOX2P48431 AC020910.2-201ENST00000603635 610 ntBASIC3.39□□□□□ -1.87
SOX2P48431 AC092747.3-201ENST00000603769 301 ntBASIC3.39□□□□□ -1.87
SOX2P48431 AC091167.4-201ENST00000605079 184 ntBASIC3.39□□□□□ -1.87
SOX2P48431 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.39□□□□□ -1.87
SOX2P48431 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.39□□□□□ -1.87
SOX2P48431 MIR3653-201ENST00000625572 110 ntBASIC3.39□□□□□ -1.87
SOX2P48431 TPTEP1-208ENST00000636884 213 ntBASIC3.39□□□□□ -1.87
SOX2P48431 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.39□□□□□ -1.87
SOX2P48431 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SOX2P48431 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SOX2P48431 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SOX2P48431 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SOX2P48431 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SOX2P48431 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.39□□□□□ -1.87
SOX2P48431 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SOX2P48431 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX2P48431 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
SOX2P48431 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.38□□□□□ -1.87
SOX2P48431 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SOX2P48431 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX2P48431 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SOX2P48431 RNU6-600P-201ENST00000362524 99 ntBASIC3.38□□□□□ -1.87
SOX2P48431 AL122016.1-201ENST00000403365 367 ntBASIC3.38□□□□□ -1.87
SOX2P48431 AL138878.1-201ENST00000405131 347 ntBASIC3.38□□□□□ -1.87
SOX2P48431 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.38□□□□□ -1.87
SOX2P48431 POLHP1-201ENST00000411806 470 ntBASIC3.38□□□□□ -1.87
SOX2P48431 USP9YP20-201ENST00000419224 558 ntBASIC3.38□□□□□ -1.87
SOX2P48431 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.38□□□□□ -1.87
SOX2P48431 AL159169.1-201ENST00000421119 127 ntBASIC3.38□□□□□ -1.87
SOX2P48431 HSPE1P1-201ENST00000421494 318 ntBASIC3.38□□□□□ -1.87
SOX2P48431 AL160275.3-201ENST00000423876 471 ntBASIC3.38□□□□□ -1.87
SOX2P48431 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.38□□□□□ -1.87
SOX2P48431 RPL27AP8-201ENST00000424277 446 ntBASIC3.38□□□□□ -1.87
SOX2P48431 PRPS1P1-201ENST00000445305 876 ntBASIC3.38□□□□□ -1.87
SOX2P48431 MRPL50P4-201ENST00000446432 475 ntBASIC3.38□□□□□ -1.87
SOX2P48431 PPP1R2P5-201ENST00000457256 603 ntBASIC3.38□□□□□ -1.87
SOX2P48431 AC087588.1-201ENST00000462203 316 ntBASIC3.38□□□□□ -1.87
SOX2P48431 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
SOX2P48431 AC083904.1-201ENST00000487828 231 ntBASIC3.38□□□□□ -1.87
SOX2P48431 UBE2CP3-201ENST00000502715 450 ntBASIC3.38□□□□□ -1.87
SOX2P48431 AC103851.1-201ENST00000506833 274 ntBASIC3.38□□□□□ -1.87
SOX2P48431 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.38□□□□□ -1.87
SOX2P48431 Y_RNA.675-201ENST00000516389 149 ntBASIC3.38□□□□□ -1.87
SOX2P48431 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.38□□□□□ -1.87
SOX2P48431 RANP9-201ENST00000519957 271 ntBASIC3.38□□□□□ -1.87
SOX2P48431 AC105029.1-201ENST00000520250 669 ntBASIC3.38□□□□□ -1.87
SOX2P48431 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX2P48431 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.38□□□□□ -1.87
SOX2P48431 AC091516.1-201ENST00000549191 703 ntBASIC3.38□□□□□ -1.87
SOX2P48431 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.38□□□□□ -1.87
SOX2P48431 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.38□□□□□ -1.87
SOX2P48431 AL592436.1-201ENST00000605135 558 ntBASIC3.38□□□□□ -1.87
SOX2P48431 AL356218.2-201ENST00000605264 187 ntBASIC3.38□□□□□ -1.87
SOX2P48431 ARF4P1-201ENST00000605447 541 ntBASIC3.38□□□□□ -1.87
SOX2P48431 AC021646.1-201ENST00000605469 484 ntBASIC3.38□□□□□ -1.87
SOX2P48431 RMST_7.1-201ENST00000621935 268 ntBASIC3.38□□□□□ -1.87
SOX2P48431 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.38□□□□□ -1.87
SOX2P48431 AC012618.3-205ENST00000637896 1496 ntBASIC3.38□□□□□ -1.87
SOX2P48431 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.38□□□□□ -1.87
SOX2P48431 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.38□□□□□ -1.87
SOX2P48431 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SOX2P48431 AC121333.1-201ENST00000567488 2709 ntBASIC3.38□□□□□ -1.87
SOX2P48431 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SOX2P48431 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX2P48431 USP8P1-201ENST00000494673 3183 ntBASIC3.38□□□□□ -1.87
SOX2P48431 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX2P48431 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SOX2P48431 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SOX2P48431 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SOX2P48431 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SOX2P48431 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.37□□□□□ -1.87
SOX2P48431 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SOX2P48431 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SOX2P48431 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SOX2P48431 RNU6-393P-201ENST00000384475 107 ntBASIC3.37□□□□□ -1.87
SOX2P48431 RNU6-831P-201ENST00000384548 107 ntBASIC3.37□□□□□ -1.87
SOX2P48431 MIR192-201ENST00000384915 110 ntBASIC3.37□□□□□ -1.87
SOX2P48431 RNU6-328P-201ENST00000390887 106 ntBASIC3.37□□□□□ -1.87
SOX2P48431 SNORD70.1-201ENST00000391007 85 ntBASIC3.37□□□□□ -1.87
SOX2P48431 AL139039.1-201ENST00000401900 692 ntBASIC3.37□□□□□ -1.87
SOX2P48431 AL590704.1-201ENST00000402856 794 ntBASIC3.37□□□□□ -1.87
SOX2P48431 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.37□□□□□ -1.87
SOX2P48431 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.37□□□□□ -1.87
SOX2P48431 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms