Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL18A1P39060 ZNF209P-201ENST00000593450 2304 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 Y_RNA.374-201ENST00000365606 101 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 RNU6-575P-201ENST00000411326 105 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 AL136133.1-201ENST00000413694 376 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 MTCO3P1-205ENST00000422088 832 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 AL354695.1-201ENST00000427935 228 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.97□□□□□ -2.09
COL18A1P39060 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.97□□□□□ -2.09
COL18A1P39060 RFC5P1-201ENST00000454419 874 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 AC104164.3-201ENST00000467363 1258 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.97□□□□□ -2.09
COL18A1P39060 RN7SL274P-201ENST00000492268 272 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.97□□□□□ -2.09
COL18A1P39060 RNA5SP220-201ENST00000516298 104 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 SNORA70.16-201ENST00000516390 95 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.97□□□□□ -2.09
COL18A1P39060 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.97□□□□□ -2.09
COL18A1P39060 AP003049.1-201ENST00000529418 457 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 CR383656.7-201ENST00000548164 174 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 AC008015.1-201ENST00000555505 465 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.97□□□□□ -2.09
COL18A1P39060 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.97□□□□□ -2.09
COL18A1P39060 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.97□□□□□ -2.09
COL18A1P39060 AC024614.2-201ENST00000577584 372 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 MIR3660-201ENST00000584845 100 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 AC098483.2-201ENST00000603158 454 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 AL031176.1-201ENST00000604554 466 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 NUTF2P8-201ENST00000604593 363 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 AL133507.1-201ENST00000605269 557 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 AC068944.2-201ENST00000610373 403 ntBASIC1.97□□□□□ -2.09
COL18A1P39060 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
COL18A1P39060 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
COL18A1P39060 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.96□□□□□ -2.1
COL18A1P39060 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COL18A1P39060 ZNF519P1-201ENST00000449011 1626 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 RNU6-839P-201ENST00000363347 108 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 RNU6-878P-201ENST00000384578 110 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 MIR217-201ENST00000384817 110 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 RNU2-28P-201ENST00000410457 189 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 RNA5SP492-201ENST00000411330 114 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 MTND1P23-201ENST00000416931 372 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 POLR2J4-204ENST00000418424 324 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 AC234781.2-201ENST00000426370 994 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.96□□□□□ -2.1
COL18A1P39060 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.96□□□□□ -2.1
COL18A1P39060 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.96□□□□□ -2.1
COL18A1P39060 RPL21P39-201ENST00000463605 483 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 AC011979.1-201ENST00000472300 483 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 RPL21P93-201ENST00000480465 489 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 AC233702.1-201ENST00000482905 502 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 AC093591.1-201ENST00000491435 481 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COL18A1P39060 COL6A4P2-205ENST00000509855 506 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 AL359273.1-201ENST00000510918 627 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 AC087373.1-201ENST00000524920 491 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.96□□□□□ -2.1
COL18A1P39060 PSMA3P-201ENST00000555485 635 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 TRAV28-201ENST00000557548 323 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.96□□□□□ -2.1
COL18A1P39060 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.96□□□□□ -2.1
COL18A1P39060 APOOP1-201ENST00000604695 592 ntBASIC1.96□□□□□ -2.1
COL18A1P39060 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.96□□□□□ -2.1
COL18A1P39060 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
COL18A1P39060 RNU6-1180P-201ENST00000364935 107 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 RNU6-354P-201ENST00000383862 107 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 RNU6-1-201ENST00000383898 107 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 RNU6-42P-201ENST00000384165 107 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 RNU6-36P-201ENST00000384172 107 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 RNU6-4P-201ENST00000384205 107 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 RNU6-5P-201ENST00000384238 107 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 RNU6-610P-201ENST00000384264 107 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 RNU6-3P-201ENST00000384314 107 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 RNU6-2-201ENST00000384627 107 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 RNU6-9-201ENST00000384776 107 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 RNU6-33P-201ENST00000384793 107 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 MIR493-201ENST00000385254 89 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.95□□□□□ -2.1
COL18A1P39060 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.95□□□□□ -2.1
COL18A1P39060 PSMA6P3-201ENST00000428242 164 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 EZH2P1-201ENST00000431167 291 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 LSM1P1-201ENST00000438629 273 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.95□□□□□ -2.1
COL18A1P39060 SEPT14P24-201ENST00000447236 180 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.95□□□□□ -2.1
COL18A1P39060 MRPL42P4-201ENST00000453267 443 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 AC034244.1-201ENST00000507687 207 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.95□□□□□ -2.1
COL18A1P39060 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.95□□□□□ -2.1
COL18A1P39060 SETP7-201ENST00000552169 453 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL18A1P39060 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.95□□□□□ -2.1
COL18A1P39060 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.95□□□□□ -2.1
COL18A1P39060 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL18A1P39060 BNIP3P24-201ENST00000593398 557 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 RNU6-6P-201ENST00000606623 107 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 AL161629.2-201ENST00000615347 275 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 AC078880.5-201ENST00000617845 421 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 AL158801.5-201ENST00000623123 465 ntBASIC1.95□□□□□ -2.1
COL18A1P39060 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms