Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.37□□□□□ -1.87
PCNAP12004 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PCNAP12004 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCNAP12004 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCNAP12004 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCNAP12004 ZNF680P1-201ENST00000436625 1469 ntBASIC3.36□□□□□ -1.87
PCNAP12004 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
PCNAP12004 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCNAP12004 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCNAP12004 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCNAP12004 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCNAP12004 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PCNAP12004 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
PCNAP12004 RNU6-1097P-201ENST00000363586 107 ntBASIC3.36□□□□□ -1.87
PCNAP12004 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCNAP12004 UBE2V1P2-201ENST00000397758 440 ntBASIC3.36□□□□□ -1.87
PCNAP12004 AL591416.1-201ENST00000404015 867 ntBASIC3.36□□□□□ -1.87
PCNAP12004 AL590002.1-201ENST00000406554 418 ntBASIC3.36□□□□□ -1.87
PCNAP12004 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCNAP12004 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.36□□□□□ -1.87
PCNAP12004 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.36□□□□□ -1.87
PCNAP12004 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.36□□□□□ -1.87
PCNAP12004 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCNAP12004 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.36□□□□□ -1.87
PCNAP12004 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.36□□□□□ -1.87
PCNAP12004 BNIP3P2-201ENST00000441221 577 ntBASIC3.36□□□□□ -1.87
PCNAP12004 NEFMP1-201ENST00000443423 1006 ntBASIC3.36□□□□□ -1.87
PCNAP12004 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.36□□□□□ -1.87
PCNAP12004 AL357552.1-201ENST00000445254 415 ntBASIC3.36□□□□□ -1.87
PCNAP12004 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.36□□□□□ -1.87
PCNAP12004 SNORD105B-201ENST00000458770 79 ntBASIC3.36□□□□□ -1.87
PCNAP12004 AC010401.1-201ENST00000463867 348 ntBASIC3.36□□□□□ -1.87
PCNAP12004 AC011352.1-201ENST00000512300 793 ntBASIC3.36□□□□□ -1.87
PCNAP12004 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.36□□□□□ -1.87
PCNAP12004 SNORA70.19-201ENST00000516717 90 ntBASIC3.36□□□□□ -1.87
PCNAP12004 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.36□□□□□ -1.87
PCNAP12004 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.36□□□□□ -1.87
PCNAP12004 AC027807.1-201ENST00000559921 996 ntBASIC3.36□□□□□ -1.87
PCNAP12004 AC136619.2-201ENST00000563361 631 ntBASIC3.36□□□□□ -1.87
PCNAP12004 AC024619.4-201ENST00000580924 316 ntBASIC3.36□□□□□ -1.87
PCNAP12004 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.36□□□□□ -1.87
PCNAP12004 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.36□□□□□ -1.87
PCNAP12004 AC012507.3-201ENST00000603556 477 ntBASIC3.36□□□□□ -1.87
PCNAP12004 AC013553.2-201ENST00000604244 589 ntBASIC3.36□□□□□ -1.87
PCNAP12004 AC008536.2-201ENST00000607284 349 ntBASIC3.36□□□□□ -1.87
PCNAP12004 AC092794.1-201ENST00000612734 582 ntBASIC3.36□□□□□ -1.87
PCNAP12004 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.36□□□□□ -1.87
PCNAP12004 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
PCNAP12004 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCNAP12004 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PCNAP12004 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PCNAP12004 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PCNAP12004 Y_RNA.126-201ENST00000363382 111 ntBASIC3.35□□□□□ -1.87
PCNAP12004 RNU6-1090P-201ENST00000364065 94 ntBASIC3.35□□□□□ -1.87
PCNAP12004 SNORA62.1-201ENST00000364287 154 ntBASIC3.35□□□□□ -1.87
PCNAP12004 RNU4-12P-201ENST00000365233 139 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PCNAP12004 RNU6-946P-201ENST00000383878 107 ntBASIC3.35□□□□□ -1.87
PCNAP12004 SNORA5A-201ENST00000384111 134 ntBASIC3.35□□□□□ -1.87
PCNAP12004 SNORA24.1-201ENST00000384401 135 ntBASIC3.35□□□□□ -1.87
PCNAP12004 RNU6-14P-201ENST00000384630 106 ntBASIC3.35□□□□□ -1.87
PCNAP12004 SNORD115-47-201ENST00000391226 86 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AL139397.2-201ENST00000404529 772 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.35□□□□□ -1.87
PCNAP12004 RAB9AP3-201ENST00000412737 573 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.35□□□□□ -1.87
PCNAP12004 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.35□□□□□ -1.87
PCNAP12004 AC092809.3-201ENST00000415453 231 ntBASIC3.35□□□□□ -1.87
PCNAP12004 BTF3L4P3-201ENST00000418879 476 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AC012498.1-201ENST00000424037 437 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.35□□□□□ -1.87
PCNAP12004 BX679664.1-201ENST00000434429 253 ntBASIC3.35□□□□□ -1.87
PCNAP12004 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PCNAP12004 AC125238.1-201ENST00000448842 249 ntBASIC3.35□□□□□ -1.87
PCNAP12004 RAB9AP1-201ENST00000449393 573 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.35□□□□□ -1.87
PCNAP12004 AC006512.1-201ENST00000468816 291 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AL121769.1-201ENST00000469473 401 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AC126182.1-201ENST00000478134 357 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AF213884.2-201ENST00000510417 903 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.35□□□□□ -1.87
PCNAP12004 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.35□□□□□ -1.87
PCNAP12004 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.35□□□□□ -1.87
PCNAP12004 SCARNA15.2-201ENST00000516409 127 ntBASIC3.35□□□□□ -1.87
PCNAP12004 RN7SKP258-201ENST00000517151 304 ntBASIC3.35□□□□□ -1.87
PCNAP12004 RNU6-711P-201ENST00000517255 106 ntBASIC3.35□□□□□ -1.87
PCNAP12004 TRMT10BP1-201ENST00000519377 943 ntBASIC3.35□□□□□ -1.87
PCNAP12004 OR4R1P-201ENST00000529879 463 ntBASIC3.35□□□□□ -1.87
PCNAP12004 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.35□□□□□ -1.87
PCNAP12004 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.35□□□□□ -1.87
PCNAP12004 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.35□□□□□ -1.87
PCNAP12004 MIR3921-201ENST00000577308 85 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.35□□□□□ -1.87
PCNAP12004 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AL670379.6-201ENST00000603753 252 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AL670379.11-201ENST00000604059 253 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AC008162.1-201ENST00000604718 254 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AL670379.1-201ENST00000604752 252 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AL670379.5-201ENST00000605253 252 ntBASIC3.35□□□□□ -1.87
PCNAP12004 AL670379.12-201ENST00000605291 253 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms