Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 Y_RNA.20-201ENST00000362479 113 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 Y_RNA.27-201ENST00000362540 103 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 RNU1-94P-201ENST00000362627 173 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 RN7SKP224-201ENST00000364140 325 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 Y_RNA.245-201ENST00000364493 95 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 RNU6-200P-201ENST00000364743 107 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 HDGFP1-201ENST00000405943 252 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AC009237.10-201ENST00000414112 510 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 NDUFB4P7-201ENST00000423198 363 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 RPL21P91-201ENST00000429231 479 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AL591623.2-201ENST00000449978 222 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AC013470.1-201ENST00000453438 462 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 RN7SKP210-201ENST00000459176 261 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 RPL23AP45-201ENST00000476406 468 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 OR2AO1P-201ENST00000476497 403 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 RN7SL184P-201ENST00000488308 297 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 RN7SL629P-201ENST00000489622 285 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 RN7SL547P-201ENST00000490793 290 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 RNU6-570P-201ENST00000517051 105 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 IGKV2D-23-201ENST00000518179 286 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AL590705.4-201ENST00000532209 134 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AC093249.4-201ENST00000564755 259 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AMZ2P1-203ENST00000565833 850 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AC008121.1-201ENST00000603244 268 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AL161629.2-201ENST00000615347 275 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AL731566.2-201ENST00000618971 317 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 MIR6715B-201ENST00000637172 77 ntBASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHISA3A0PJX4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SHISA3A0PJX4 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
SHISA3A0PJX4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 MUC2-202ENST00000613187 4845 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 AL359693.1-201ENST00000614959 2407 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 RNU6-335P-201ENST00000364563 113 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 SNORA67-201ENST00000384423 137 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 TBCAP2-201ENST00000416175 326 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 AL590135.1-201ENST00000422215 156 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 RPL34P20-201ENST00000442771 351 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 AC009127.1-201ENST00000467090 155 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 RN7SL177P-201ENST00000476596 299 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 AC104164.2-201ENST00000496953 495 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 OR51K1P-201ENST00000510214 950 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 SNORA31.6-201ENST00000516241 130 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 Y_RNA.673-201ENST00000516306 88 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 Y_RNA.713-201ENST00000517013 96 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 Y_RNA.719-201ENST00000517156 106 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 IGKV2-18-201ENST00000522607 343 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 AC024940.3-201ENST00000538551 316 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 SUMO2P15-201ENST00000604285 278 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 AC126915.2-201ENST00000610957 190 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 Z75746.1-201ENST00000440243 2080 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 AP000560.1-201ENST00000624150 1937 ntBASIC4.21□□□□□ -1.74
SHISA3A0PJX4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.21□□□□□ -1.74
SHISA3A0PJX4 LINC01109-201ENST00000603837 3081 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SHISA3A0PJX4 MIR335-201ENST00000362173 94 ntBASIC4.2□□□□□ -1.74
SHISA3A0PJX4 U3.13-201ENST00000364804 214 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms