Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 C1QBPP2-201ENST00000528754 825 ntBASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.36□□□□□ -0.11
HLA-DRB4X5D2U9 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 CABP2-204ENST00000636477 941 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HLA-DRB4X5D2U9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 AC020763.4-201ENST00000623414 4170 ntBASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 AC104417.2-201ENST00000562989 1793 ntBASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 AL138781.2-201ENST00000617896 1843 ntBASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HLA-DRB4X5D2U9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
HLA-DRB4X5D2U9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
HLA-DRB4X5D2U9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.11
HLA-DRB4X5D2U9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.33□□□□□ -0.11
HLA-DRB4X5D2U9 AL032819.2-201ENST00000624543 2162 ntBASIC14.33□□□□□ -0.11
HLA-DRB4X5D2U9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 RPPH1-201ENST00000516869 333 ntBASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HLA-DRB4X5D2U9 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms