Protein–RNA interactions for Protein: Q9Y6M7

SLC4A7, Sodium bicarbonate cotransporter 3, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A7Q9Y6M7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC4A7Q9Y6M7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC4A7Q9Y6M7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC4A7Q9Y6M7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC4A7Q9Y6M7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC4A7Q9Y6M7 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.79■□□□□ 0.92
SLC4A7Q9Y6M7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SLC4A7Q9Y6M7 KRT8P11-201ENST00000409686 1436 ntBASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 AC034232.1-201ENST00000506026 1064 ntBASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
SLC4A7Q9Y6M7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SLC4A7Q9Y6M7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC4A7Q9Y6M7 AP001271.2-201ENST00000624018 1556 ntBASIC20.77■□□□□ 0.92
SLC4A7Q9Y6M7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC4A7Q9Y6M7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC4A7Q9Y6M7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.77■□□□□ 0.92
SLC4A7Q9Y6M7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC4A7Q9Y6M7 RASA4DP-201ENST00000460726 1199 ntBASIC20.77■□□□□ 0.92
SLC4A7Q9Y6M7 AC092597.1-201ENST00000487352 616 ntBASIC20.77■□□□□ 0.92
SLC4A7Q9Y6M7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC4A7Q9Y6M7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.77■□□□□ 0.92
SLC4A7Q9Y6M7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.77■□□□□ 0.92
SLC4A7Q9Y6M7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SLC4A7Q9Y6M7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC4A7Q9Y6M7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC4A7Q9Y6M7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 AC016734.2-201ENST00000624325 1377 ntBASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 MIR3180-1-201ENST00000580374 94 ntBASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 MIR3180-3-201ENST00000584616 94 ntBASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC4A7Q9Y6M7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC4A7Q9Y6M7 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC4A7Q9Y6M7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC4A7Q9Y6M7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC4A7Q9Y6M7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC4A7Q9Y6M7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC4A7Q9Y6M7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC4A7Q9Y6M7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC4A7Q9Y6M7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.74■□□□□ 0.91
SLC4A7Q9Y6M7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC4A7Q9Y6M7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.74■□□□□ 0.91
SLC4A7Q9Y6M7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC4A7Q9Y6M7 BX119927.1-201ENST00000636596 1552 ntBASIC20.74■□□□□ 0.91
SLC4A7Q9Y6M7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC4A7Q9Y6M7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC4A7Q9Y6M7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms