Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 KRT8P41-201ENST00000533985 1514 ntBASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 AP000523.1-201ENST00000398242 1049 ntBASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSX2IPQ9Y2D8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 AL031133.1-201ENST00000406807 723 ntBASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 AC011558.1-201ENST00000623459 338 ntBASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX2IPQ9Y2D8 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 UPK3BP1-201ENST00000428678 509 ntBASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 AL358472.4-201ENST00000633140 710 ntBASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SSX2IPQ9Y2D8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SSX2IPQ9Y2D8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms