Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 RASA4DP-201ENST00000460726 1199 ntBASIC18.02■□□□□ 0.48
LHX6Q9UPM6 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 RN7SL718P-201ENST00000581254 303 ntBASIC18.02■□□□□ 0.48
LHX6Q9UPM6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LHX6Q9UPM6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
LHX6Q9UPM6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LHX6Q9UPM6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
LHX6Q9UPM6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LHX6Q9UPM6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 TUBB8P6-201ENST00000436895 1288 ntBASIC18.01■□□□□ 0.47
LHX6Q9UPM6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 AP003041.3-201ENST00000527151 707 ntBASIC18.01■□□□□ 0.47
LHX6Q9UPM6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 AL691403.2-201ENST00000618460 490 ntBASIC18.01■□□□□ 0.47
LHX6Q9UPM6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LHX6Q9UPM6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18■□□□□ 0.47
LHX6Q9UPM6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LHX6Q9UPM6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18■□□□□ 0.47
LHX6Q9UPM6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LHX6Q9UPM6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LHX6Q9UPM6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18■□□□□ 0.47
LHX6Q9UPM6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LHX6Q9UPM6 HBZP1-201ENST00000354915 429 ntBASIC18■□□□□ 0.47
LHX6Q9UPM6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18■□□□□ 0.47
LHX6Q9UPM6 PMS2P2-201ENST00000425039 1128 ntBASIC18■□□□□ 0.47
LHX6Q9UPM6 AC244107.1-201ENST00000442033 332 ntBASIC18■□□□□ 0.47
LHX6Q9UPM6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18■□□□□ 0.47
LHX6Q9UPM6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LHX6Q9UPM6 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC18■□□□□ 0.47
LHX6Q9UPM6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18■□□□□ 0.47
LHX6Q9UPM6 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC18■□□□□ 0.47
LHX6Q9UPM6 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18■□□□□ 0.47
LHX6Q9UPM6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18■□□□□ 0.47
LHX6Q9UPM6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
LHX6Q9UPM6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18■□□□□ 0.47
LHX6Q9UPM6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18■□□□□ 0.47
LHX6Q9UPM6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18■□□□□ 0.47
LHX6Q9UPM6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18■□□□□ 0.47
LHX6Q9UPM6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18■□□□□ 0.47
LHX6Q9UPM6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LHX6Q9UPM6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LHX6Q9UPM6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LHX6Q9UPM6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18■□□□□ 0.47
LHX6Q9UPM6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 IL9RP2-201ENST00000423948 1312 ntBASIC17.99■□□□□ 0.47
LHX6Q9UPM6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 MIR564-202ENST00000385049 94 ntBASIC17.99■□□□□ 0.47
LHX6Q9UPM6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 TSPY12P-201ENST00000421279 868 ntBASIC17.99■□□□□ 0.47
LHX6Q9UPM6 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 CA15P1-201ENST00000481698 905 ntBASIC17.99■□□□□ 0.47
LHX6Q9UPM6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 KRT18P31-201ENST00000506277 1292 ntBASIC17.99■□□□□ 0.47
LHX6Q9UPM6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 FOSL1P1-201ENST00000511041 816 ntBASIC17.99■□□□□ 0.47
LHX6Q9UPM6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms