Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.53■□□□□ 0.88
GTF3C4Q9UKN8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 CYP2D8P-201ENST00000433633 1490 ntBASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 AC091390.4-202ENST00000476426 537 ntBASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 AC097488.1-201ENST00000507834 756 ntBASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 AC012306.2-201ENST00000609350 630 ntBASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 DGCR10-201ENST00000609839 495 ntBASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
GTF3C4Q9UKN8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GTF3C4Q9UKN8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
GTF3C4Q9UKN8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GTF3C4Q9UKN8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 AC104417.2-201ENST00000562989 1793 ntBASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 AP000692.2-201ENST00000608391 879 ntBASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 AC097493.4-201ENST00000641197 219 ntBASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GTF3C4Q9UKN8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 AC004408.2-201ENST00000623613 2777 ntBASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 CRYGFP-201ENST00000418459 633 ntBASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 SLC25A1P4-201ENST00000567977 778 ntBASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
GTF3C4Q9UKN8 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms