Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
RIMBP3Q9UFD9 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
RIMBP3Q9UFD9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.46
RIMBP3Q9UFD9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC30.39■■■□□ 2.46
RIMBP3Q9UFD9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC30.39■■■□□ 2.46
RIMBP3Q9UFD9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
RIMBP3Q9UFD9 ATP6V0CP3-201ENST00000417255 467 ntBASIC30.39■■■□□ 2.46
RIMBP3Q9UFD9 AC007967.2-201ENST00000432613 625 ntBASIC30.39■■■□□ 2.46
RIMBP3Q9UFD9 PAWRP1-201ENST00000451083 565 ntBASIC30.39■■■□□ 2.46
RIMBP3Q9UFD9 ALG1L5P-201ENST00000482043 771 ntBASIC30.39■■■□□ 2.46
RIMBP3Q9UFD9 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC30.39■■■□□ 2.46
RIMBP3Q9UFD9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.45
RIMBP3Q9UFD9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
RIMBP3Q9UFD9 AC096582.2-201ENST00000510860 516 ntBASIC30.38■■■□□ 2.45
RIMBP3Q9UFD9 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
RIMBP3Q9UFD9 RNA5SP416-201ENST00000516838 111 ntBASIC30.38■■■□□ 2.45
RIMBP3Q9UFD9 AC106028.4-201ENST00000614509 607 ntBASIC30.38■■■□□ 2.45
RIMBP3Q9UFD9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
RIMBP3Q9UFD9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
RIMBP3Q9UFD9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
RIMBP3Q9UFD9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC30.38■■■□□ 2.45
RIMBP3Q9UFD9 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC30.37■■■□□ 2.45
RIMBP3Q9UFD9 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RIMBP3Q9UFD9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RIMBP3Q9UFD9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RIMBP3Q9UFD9 PTMS-202ENST00000389462 773 ntTSL 2 BASIC30.37■■■□□ 2.45
RIMBP3Q9UFD9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC30.37■■■□□ 2.45
RIMBP3Q9UFD9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC30.37■■■□□ 2.45
RIMBP3Q9UFD9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
RIMBP3Q9UFD9 AC114341.1-201ENST00000618070 349 ntBASIC30.37■■■□□ 2.45
RIMBP3Q9UFD9 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC30.37■■■□□ 2.45
RIMBP3Q9UFD9 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RIMBP3Q9UFD9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
RIMBP3Q9UFD9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RIMBP3Q9UFD9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
RIMBP3Q9UFD9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
RIMBP3Q9UFD9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
RIMBP3Q9UFD9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
RIMBP3Q9UFD9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC30.36■■■□□ 2.45
RIMBP3Q9UFD9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC30.36■■■□□ 2.45
RIMBP3Q9UFD9 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC30.36■■■□□ 2.45
RIMBP3Q9UFD9 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
RIMBP3Q9UFD9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RIMBP3Q9UFD9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC30.36■■■□□ 2.45
RIMBP3Q9UFD9 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RIMBP3Q9UFD9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
RIMBP3Q9UFD9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC30.36■■■□□ 2.45
RIMBP3Q9UFD9 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC30.36■■■□□ 2.45
RIMBP3Q9UFD9 GREM1-201ENST00000560677 623 ntTSL 4 BASIC30.36■■■□□ 2.45
RIMBP3Q9UFD9 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC30.36■■■□□ 2.45
RIMBP3Q9UFD9 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC30.36■■■□□ 2.45
RIMBP3Q9UFD9 AL096865.1-201ENST00000606796 927 ntBASIC30.36■■■□□ 2.45
RIMBP3Q9UFD9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC30.36■■■□□ 2.45
RIMBP3Q9UFD9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC30.35■■■□□ 2.45
RIMBP3Q9UFD9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC30.35■■■□□ 2.45
RIMBP3Q9UFD9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
RIMBP3Q9UFD9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC30.35■■■□□ 2.45
RIMBP3Q9UFD9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
RIMBP3Q9UFD9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
RIMBP3Q9UFD9 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
RIMBP3Q9UFD9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC30.35■■■□□ 2.45
RIMBP3Q9UFD9 AC092910.1-201ENST00000482027 1129 ntBASIC30.35■■■□□ 2.45
RIMBP3Q9UFD9 YBX1P5-201ENST00000509441 847 ntBASIC30.35■■■□□ 2.45
RIMBP3Q9UFD9 GUSBP12-201ENST00000513727 720 ntBASIC30.35■■■□□ 2.45
RIMBP3Q9UFD9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC30.35■■■□□ 2.45
RIMBP3Q9UFD9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
RIMBP3Q9UFD9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC30.35■■■□□ 2.45
RIMBP3Q9UFD9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC30.35■■■□□ 2.45
RIMBP3Q9UFD9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC30.35■■■□□ 2.45
RIMBP3Q9UFD9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC30.34■■■□□ 2.45
RIMBP3Q9UFD9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC30.34■■■□□ 2.45
RIMBP3Q9UFD9 AC254562.1-201ENST00000417586 456 ntBASIC30.34■■■□□ 2.45
RIMBP3Q9UFD9 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC30.34■■■□□ 2.45
RIMBP3Q9UFD9 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC30.34■■■□□ 2.45
RIMBP3Q9UFD9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
RIMBP3Q9UFD9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
RIMBP3Q9UFD9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
RIMBP3Q9UFD9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC30.34■■■□□ 2.45
RIMBP3Q9UFD9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
RIMBP3Q9UFD9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
RIMBP3Q9UFD9 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
RIMBP3Q9UFD9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 IGHGP-201ENST00000390555 1178 ntBASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 MIR5100-201ENST00000579544 119 ntBASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 AL035252.4-201ENST00000624174 288 ntBASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC30.33■■■□□ 2.45
RIMBP3Q9UFD9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC30.33■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms