Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 UNC93B4-201ENST00000505679 747 ntBASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
VTI1BQ9UEU0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 BICD1-207ENST00000551848 1962 ntBASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VTI1BQ9UEU0 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 AC006557.6-201ENST00000623071 864 ntBASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VTI1BQ9UEU0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 AC026366.1-201ENST00000488803 879 ntBASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 SOX15-203ENST00000570788 1093 ntBASIC18.72■□□□□ 0.59
VTI1BQ9UEU0 MIR4651-201ENST00000582622 73 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms