Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.03■□□□□ 0.48
PRDM9Q9NQV7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRDM9Q9NQV7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PRDM9Q9NQV7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PRDM9Q9NQV7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PRDM9Q9NQV7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRDM9Q9NQV7 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PRDM9Q9NQV7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.03■□□□□ 0.48
PRDM9Q9NQV7 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 TSPY23P-201ENST00000440136 739 ntBASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 AC097488.1-201ENST00000507834 756 ntBASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PRDM9Q9NQV7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PRDM9Q9NQV7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.02■□□□□ 0.47
PRDM9Q9NQV7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PRDM9Q9NQV7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PRDM9Q9NQV7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PRDM9Q9NQV7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 IRX1P1-201ENST00000438849 1838 ntBASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 MMP23A-201ENST00000234610 1017 ntBASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 MIR1238-201ENST00000408483 83 ntBASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 FITM1-202ENST00000559294 800 ntBASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 SLC25A1P4-201ENST00000567977 778 ntBASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PRDM9Q9NQV7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18■□□□□ 0.47
PRDM9Q9NQV7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRDM9Q9NQV7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18■□□□□ 0.47
PRDM9Q9NQV7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18■□□□□ 0.47
PRDM9Q9NQV7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PRDM9Q9NQV7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PRDM9Q9NQV7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PRDM9Q9NQV7 AC018445.3-201ENST00000624177 1945 ntBASIC18■□□□□ 0.47
PRDM9Q9NQV7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PRDM9Q9NQV7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18■□□□□ 0.47
PRDM9Q9NQV7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18■□□□□ 0.47
PRDM9Q9NQV7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRDM9Q9NQV7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18■□□□□ 0.47
PRDM9Q9NQV7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18■□□□□ 0.47
PRDM9Q9NQV7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRDM9Q9NQV7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18■□□□□ 0.47
PRDM9Q9NQV7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18■□□□□ 0.47
PRDM9Q9NQV7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PRDM9Q9NQV7 AP005242.2-201ENST00000580065 1175 ntBASIC18■□□□□ 0.47
PRDM9Q9NQV7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18■□□□□ 0.47
PRDM9Q9NQV7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18■□□□□ 0.47
PRDM9Q9NQV7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18■□□□□ 0.47
PRDM9Q9NQV7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18■□□□□ 0.47
PRDM9Q9NQV7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PRDM9Q9NQV7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PRDM9Q9NQV7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PRDM9Q9NQV7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18■□□□□ 0.47
PRDM9Q9NQV7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 CRYGFP-201ENST00000418459 633 ntBASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms