Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 PHB2-202ENST00000440277 996 ntTSL 5 BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 NEK4P2-201ENST00000580004 1012 ntBASIC22.18■■□□□ 1.14
EFCC1Q9HA90 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.18■■□□□ 1.14
EFCC1Q9HA90 LINC01521-201ENST00000504184 1943 ntBASIC22.18■■□□□ 1.14
EFCC1Q9HA90 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.17■■□□□ 1.14
EFCC1Q9HA90 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 KRT8P41-201ENST00000533985 1514 ntBASIC22.16■■□□□ 1.14
EFCC1Q9HA90 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 FEM1AP1-201ENST00000431297 1995 ntBASIC22.16■■□□□ 1.14
EFCC1Q9HA90 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 AL022342.1-201ENST00000400363 863 ntBASIC22.16■■□□□ 1.14
EFCC1Q9HA90 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 CD37-204ENST00000535669 1674 ntTSL 2 BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
EFCC1Q9HA90 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 SPDYE15P-201ENST00000424157 909 ntBASIC22.15■■□□□ 1.14
EFCC1Q9HA90 SPDYE13P-201ENST00000445314 798 ntBASIC22.15■■□□□ 1.14
EFCC1Q9HA90 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 AP001271.2-201ENST00000624018 1556 ntBASIC22.15■■□□□ 1.14
EFCC1Q9HA90 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
EFCC1Q9HA90 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
EFCC1Q9HA90 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.14■■□□□ 1.14
EFCC1Q9HA90 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
EFCC1Q9HA90 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms