Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 AC233263.1-201ENST00000578059 224 ntBASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC68Q9H2F9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 C1QL1P1-201ENST00000568105 661 ntBASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 AC006058.3-201ENST00000606217 1069 ntBASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC68Q9H2F9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC68Q9H2F9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.09■□□□□ 0.65
CCDC68Q9H2F9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms