Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDT1Q9H211 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CDT1Q9H211 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDT1Q9H211 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.67■□□□□ 0.9
CDT1Q9H211 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.67■□□□□ 0.9
CDT1Q9H211 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.67■□□□□ 0.9
CDT1Q9H211 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.67■□□□□ 0.9
CDT1Q9H211 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDT1Q9H211 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDT1Q9H211 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CDT1Q9H211 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDT1Q9H211 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDT1Q9H211 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CDT1Q9H211 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CDT1Q9H211 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CDT1Q9H211 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDT1Q9H211 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDT1Q9H211 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDT1Q9H211 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.66■□□□□ 0.9
CDT1Q9H211 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDT1Q9H211 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDT1Q9H211 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDT1Q9H211 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDT1Q9H211 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDT1Q9H211 LIN28AP1-201ENST00000429574 405 ntBASIC20.66■□□□□ 0.9
CDT1Q9H211 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDT1Q9H211 ATP5G1P1-201ENST00000448724 379 ntBASIC20.66■□□□□ 0.9
CDT1Q9H211 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDT1Q9H211 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.66■□□□□ 0.9
CDT1Q9H211 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CDT1Q9H211 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.66■□□□□ 0.9
CDT1Q9H211 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CDT1Q9H211 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.66■□□□□ 0.9
CDT1Q9H211 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.66■□□□□ 0.9
CDT1Q9H211 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.66■□□□□ 0.9
CDT1Q9H211 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CDT1Q9H211 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDT1Q9H211 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CDT1Q9H211 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDT1Q9H211 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.66■□□□□ 0.9
CDT1Q9H211 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDT1Q9H211 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDT1Q9H211 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.66■□□□□ 0.9
CDT1Q9H211 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDT1Q9H211 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.65■□□□□ 0.9
CDT1Q9H211 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CDT1Q9H211 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDT1Q9H211 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDT1Q9H211 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
CDT1Q9H211 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.65■□□□□ 0.9
CDT1Q9H211 AL138966.2-201ENST00000621997 464 ntBASIC20.65■□□□□ 0.9
CDT1Q9H211 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDT1Q9H211 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CDT1Q9H211 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
CDT1Q9H211 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.64■□□□□ 0.9
CDT1Q9H211 FEM1AP3-201ENST00000403722 1741 ntBASIC20.64■□□□□ 0.9
CDT1Q9H211 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CDT1Q9H211 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CDT1Q9H211 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.64■□□□□ 0.89
CDT1Q9H211 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CDT1Q9H211 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDT1Q9H211 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDT1Q9H211 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDT1Q9H211 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.64■□□□□ 0.89
CDT1Q9H211 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.64■□□□□ 0.89
CDT1Q9H211 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.64■□□□□ 0.89
CDT1Q9H211 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.64■□□□□ 0.89
CDT1Q9H211 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.64■□□□□ 0.89
CDT1Q9H211 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.64■□□□□ 0.89
CDT1Q9H211 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDT1Q9H211 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDT1Q9H211 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CDT1Q9H211 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.63■□□□□ 0.89
CDT1Q9H211 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.63■□□□□ 0.89
CDT1Q9H211 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.63■□□□□ 0.89
CDT1Q9H211 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.63■□□□□ 0.89
CDT1Q9H211 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDT1Q9H211 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDT1Q9H211 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDT1Q9H211 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.63■□□□□ 0.89
CDT1Q9H211 KRT8P45-201ENST00000414328 1447 ntBASIC20.63■□□□□ 0.89
CDT1Q9H211 KRT8P3-201ENST00000519669 1449 ntBASIC20.63■□□□□ 0.89
CDT1Q9H211 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CDT1Q9H211 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDT1Q9H211 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.63■□□□□ 0.89
CDT1Q9H211 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDT1Q9H211 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDT1Q9H211 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDT1Q9H211 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.63■□□□□ 0.89
CDT1Q9H211 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.63■□□□□ 0.89
CDT1Q9H211 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.63■□□□□ 0.89
CDT1Q9H211 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDT1Q9H211 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDT1Q9H211 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.63■□□□□ 0.89
CDT1Q9H211 AC006011.2-201ENST00000621313 1158 ntBASIC20.63■□□□□ 0.89
CDT1Q9H211 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.63■□□□□ 0.89
CDT1Q9H211 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDT1Q9H211 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDT1Q9H211 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDT1Q9H211 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms