Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 MAGOH-201ENST00000371466 500 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 PPCS-204ENST00000372562 966 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 RNU6-116P-201ENST00000384042 109 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 RNU6-692P-201ENST00000384496 107 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 HLA-DQB1-203ENST00000399082 1219 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 SET-205ENST00000409104 962 ntTSL 5 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 RN7SKP58-201ENST00000411010 305 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 RN7SKP112-201ENST00000411213 318 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 RPL17P11-201ENST00000417593 544 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 DSTNP1-201ENST00000419906 465 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC026271.2-201ENST00000428091 497 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 HMGB3P5-201ENST00000428894 612 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 NPM1P25-201ENST00000429734 854 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC013467.1-201ENST00000430717 1041 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 MTCO1P43-201ENST00000431831 488 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 TPTE2P1-204ENST00000435256 593 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 RHOQP3-201ENST00000437982 621 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 MTND3P6-201ENST00000485242 339 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 OR2A1-AS1-207ENST00000486094 819 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 BAALC-AS1-202ENST00000500902 993 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 OR5H5P-201ENST00000503164 928 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC106806.2-201ENST00000509365 500 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC006160.1-201ENST00000511010 750 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 RNU6-467P-201ENST00000517027 110 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 MSRA-205ENST00000518255 674 ntTSL 5 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AP001330.3-201ENST00000520123 633 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC245187.1-201ENST00000520162 559 ntTSL 4 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 FCF1-202ENST00000534938 794 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AL442163.2-201ENST00000553912 710 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AL121594.4-201ENST00000556211 1196 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC010525.1-201ENST00000585559 441 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 ZFP14-202ENST00000589280 642 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 PCNAP1-202ENST00000595299 752 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AP003465.2-201ENST00000602571 373 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 RPL21P136-201ENST00000605378 396 ntBASIC4.04□□□□□ -1.76
KRTAP4-4Q9BYR3 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms