Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 PRSS29P-201ENST00000440800 595 ntBASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 MIR6752-201ENST00000618442 71 ntBASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 Z92544.3-201ENST00000624747 417 ntBASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COL25A1Q9BXS0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 SIGLEC30P-201ENST00000455569 941 ntBASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 UNC93B6-202ENST00000528242 690 ntBASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 GPR32P1-201ENST00000601788 811 ntBASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 AC036111.1-201ENST00000533973 1582 ntBASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COL25A1Q9BXS0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 RBM17P3-201ENST00000417687 1192 ntBASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 AC021087.4-201ENST00000563761 564 ntBASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 AC114341.1-201ENST00000618070 349 ntBASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.34■□□□□ 0.69
COL25A1Q9BXS0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL25A1Q9BXS0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
COL25A1Q9BXS0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL25A1Q9BXS0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL25A1Q9BXS0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
COL25A1Q9BXS0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL25A1Q9BXS0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
COL25A1Q9BXS0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
COL25A1Q9BXS0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
COL25A1Q9BXS0 OR8S1-201ENST00000310194 1080 ntBASIC19.33■□□□□ 0.68
COL25A1Q9BXS0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COL25A1Q9BXS0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.33■□□□□ 0.68
COL25A1Q9BXS0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.33■□□□□ 0.68
COL25A1Q9BXS0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.33■□□□□ 0.68
COL25A1Q9BXS0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.33■□□□□ 0.68
COL25A1Q9BXS0 AC096582.2-201ENST00000510860 516 ntBASIC19.33■□□□□ 0.68
COL25A1Q9BXS0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.33■□□□□ 0.68
COL25A1Q9BXS0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.33■□□□□ 0.68
COL25A1Q9BXS0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.33■□□□□ 0.68
COL25A1Q9BXS0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.33■□□□□ 0.68
COL25A1Q9BXS0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL25A1Q9BXS0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL25A1Q9BXS0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.68
COL25A1Q9BXS0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COL25A1Q9BXS0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL25A1Q9BXS0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COL25A1Q9BXS0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.32■□□□□ 0.68
COL25A1Q9BXS0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.32■□□□□ 0.68
COL25A1Q9BXS0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.32■□□□□ 0.68
COL25A1Q9BXS0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
COL25A1Q9BXS0 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL25A1Q9BXS0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL25A1Q9BXS0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.32■□□□□ 0.68
COL25A1Q9BXS0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.32■□□□□ 0.68
COL25A1Q9BXS0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.32■□□□□ 0.68
COL25A1Q9BXS0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.32■□□□□ 0.68
COL25A1Q9BXS0 KRT8P3-201ENST00000519669 1449 ntBASIC19.32■□□□□ 0.68
COL25A1Q9BXS0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COL25A1Q9BXS0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms