Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.91■□□□□ 0.14
SSBP3Q9BWW4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.91■□□□□ 0.14
SSBP3Q9BWW4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.91■□□□□ 0.14
SSBP3Q9BWW4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.91■□□□□ 0.14
SSBP3Q9BWW4 KRT18P21-201ENST00000515767 1272 ntBASIC15.91■□□□□ 0.14
SSBP3Q9BWW4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.91■□□□□ 0.14
SSBP3Q9BWW4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.91■□□□□ 0.14
SSBP3Q9BWW4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSBP3Q9BWW4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.91■□□□□ 0.14
SSBP3Q9BWW4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSBP3Q9BWW4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSBP3Q9BWW4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SSBP3Q9BWW4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSBP3Q9BWW4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.91■□□□□ 0.14
SSBP3Q9BWW4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SSBP3Q9BWW4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 CCR12P-201ENST00000446203 998 ntBASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 PRSS44-201ENST00000515154 1146 ntBASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SSBP3Q9BWW4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 AC116562.4-202ENST00000641738 218 ntBASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SSBP3Q9BWW4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 AL020996.1-203ENST00000536896 2307 ntBASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 AC113347.1-201ENST00000413321 391 ntBASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 SLC25A1P2-201ENST00000430693 912 ntBASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 CKBP1-201ENST00000565489 1086 ntBASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.88■□□□□ 0.13
SSBP3Q9BWW4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSBP3Q9BWW4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSBP3Q9BWW4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSBP3Q9BWW4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SSBP3Q9BWW4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms