Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.72■□□□□ 0.59
CFAP54Q96N23 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
CFAP54Q96N23 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CFAP54Q96N23 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.72■□□□□ 0.59
CFAP54Q96N23 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.72■□□□□ 0.59
CFAP54Q96N23 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CFAP54Q96N23 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.72■□□□□ 0.59
CFAP54Q96N23 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.72■□□□□ 0.59
CFAP54Q96N23 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CFAP54Q96N23 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CFAP54Q96N23 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP54Q96N23 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CFAP54Q96N23 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.71■□□□□ 0.59
CFAP54Q96N23 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP54Q96N23 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.71■□□□□ 0.59
CFAP54Q96N23 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.71■□□□□ 0.59
CFAP54Q96N23 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP54Q96N23 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP54Q96N23 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP54Q96N23 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP54Q96N23 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP54Q96N23 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP54Q96N23 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.71■□□□□ 0.59
CFAP54Q96N23 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.71■□□□□ 0.59
CFAP54Q96N23 MIR7706-201ENST00000613747 67 ntBASIC18.71■□□□□ 0.59
CFAP54Q96N23 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CFAP54Q96N23 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CFAP54Q96N23 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.71■□□□□ 0.58
CFAP54Q96N23 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP54Q96N23 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP54Q96N23 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP54Q96N23 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP54Q96N23 RPS8P6-201ENST00000426177 609 ntBASIC18.7■□□□□ 0.58
CFAP54Q96N23 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.7■□□□□ 0.58
CFAP54Q96N23 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.7■□□□□ 0.58
CFAP54Q96N23 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CFAP54Q96N23 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.7■□□□□ 0.58
CFAP54Q96N23 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CFAP54Q96N23 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP54Q96N23 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP54Q96N23 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.7■□□□□ 0.58
CFAP54Q96N23 AP005901.3-202ENST00000581653 237 ntBASIC18.7■□□□□ 0.58
CFAP54Q96N23 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.7■□□□□ 0.58
CFAP54Q96N23 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.7■□□□□ 0.58
CFAP54Q96N23 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP54Q96N23 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP54Q96N23 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.7■□□□□ 0.58
CFAP54Q96N23 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP54Q96N23 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP54Q96N23 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP54Q96N23 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP54Q96N23 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.7■□□□□ 0.58
CFAP54Q96N23 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CFAP54Q96N23 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
CFAP54Q96N23 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.7■□□□□ 0.58
CFAP54Q96N23 TUBB8P6-201ENST00000436895 1288 ntBASIC18.7■□□□□ 0.58
CFAP54Q96N23 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP54Q96N23 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP54Q96N23 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.69■□□□□ 0.58
CFAP54Q96N23 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.69■□□□□ 0.58
CFAP54Q96N23 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP54Q96N23 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP54Q96N23 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.69■□□□□ 0.58
CFAP54Q96N23 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.69■□□□□ 0.58
CFAP54Q96N23 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.69■□□□□ 0.58
CFAP54Q96N23 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.69■□□□□ 0.58
CFAP54Q96N23 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
CFAP54Q96N23 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP54Q96N23 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP54Q96N23 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CFAP54Q96N23 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP54Q96N23 AC018712.1-201ENST00000455767 687 ntBASIC18.69■□□□□ 0.58
CFAP54Q96N23 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CFAP54Q96N23 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.69■□□□□ 0.58
CFAP54Q96N23 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP54Q96N23 AC083906.6-201ENST00000641366 219 ntBASIC18.69■□□□□ 0.58
CFAP54Q96N23 AC079781.4-201ENST00000641908 219 ntBASIC18.69■□□□□ 0.58
CFAP54Q96N23 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CFAP54Q96N23 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CFAP54Q96N23 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.68■□□□□ 0.58
CFAP54Q96N23 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.68■□□□□ 0.58
CFAP54Q96N23 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP54Q96N23 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP54Q96N23 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.68■□□□□ 0.58
CFAP54Q96N23 AC074051.2-201ENST00000565115 352 ntBASIC18.68■□□□□ 0.58
CFAP54Q96N23 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.68■□□□□ 0.58
CFAP54Q96N23 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP54Q96N23 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.68■□□□□ 0.58
CFAP54Q96N23 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CFAP54Q96N23 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.68■□□□□ 0.58
CFAP54Q96N23 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CFAP54Q96N23 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP54Q96N23 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP54Q96N23 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.68■□□□□ 0.58
CFAP54Q96N23 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.68■□□□□ 0.58
CFAP54Q96N23 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.68■□□□□ 0.58
CFAP54Q96N23 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP54Q96N23 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.68■□□□□ 0.58
CFAP54Q96N23 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CFAP54Q96N23 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms