Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 LINC00565-201ENST00000562710 2331 ntBASIC16.17■□□□□ 0.18
SPG11Q96JI7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SPG11Q96JI7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SPG11Q96JI7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SPG11Q96JI7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.16■□□□□ 0.18
SPG11Q96JI7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.16■□□□□ 0.18
SPG11Q96JI7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.16■□□□□ 0.18
SPG11Q96JI7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.16■□□□□ 0.18
SPG11Q96JI7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.16■□□□□ 0.18
SPG11Q96JI7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.16■□□□□ 0.18
SPG11Q96JI7 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SPG11Q96JI7 AC120498.9-201ENST00000339021 3867 ntBASIC16.16■□□□□ 0.18
SPG11Q96JI7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SPG11Q96JI7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
SPG11Q96JI7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
SPG11Q96JI7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SPG11Q96JI7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SPG11Q96JI7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SPG11Q96JI7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.16■□□□□ 0.18
SPG11Q96JI7 GPAT2P1-201ENST00000444924 1672 ntBASIC16.16■□□□□ 0.18
SPG11Q96JI7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPG11Q96JI7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPG11Q96JI7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPG11Q96JI7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.15■□□□□ 0.18
SPG11Q96JI7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPG11Q96JI7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.15■□□□□ 0.18
SPG11Q96JI7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.15■□□□□ 0.18
SPG11Q96JI7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPG11Q96JI7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.15■□□□□ 0.18
SPG11Q96JI7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPG11Q96JI7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPG11Q96JI7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.15■□□□□ 0.18
SPG11Q96JI7 AC093525.10-201ENST00000625130 1569 ntBASIC16.15■□□□□ 0.18
SPG11Q96JI7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.15■□□□□ 0.18
SPG11Q96JI7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPG11Q96JI7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPG11Q96JI7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPG11Q96JI7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPG11Q96JI7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.15■□□□□ 0.18
SPG11Q96JI7 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.15■□□□□ 0.18
SPG11Q96JI7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SPG11Q96JI7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.15■□□□□ 0.18
SPG11Q96JI7 AC092667.1-201ENST00000434301 2586 ntBASIC16.15■□□□□ 0.18
SPG11Q96JI7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SPG11Q96JI7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.15■□□□□ 0.18
SPG11Q96JI7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SPG11Q96JI7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPG11Q96JI7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SPG11Q96JI7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.15■□□□□ 0.18
SPG11Q96JI7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.14■□□□□ 0.18
SPG11Q96JI7 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPG11Q96JI7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPG11Q96JI7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPG11Q96JI7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SPG11Q96JI7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
SPG11Q96JI7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPG11Q96JI7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SPG11Q96JI7 KRT18P58-201ENST00000527480 1120 ntBASIC16.14■□□□□ 0.17
SPG11Q96JI7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.14■□□□□ 0.17
SPG11Q96JI7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.14■□□□□ 0.17
SPG11Q96JI7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.14■□□□□ 0.17
SPG11Q96JI7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
SPG11Q96JI7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.14■□□□□ 0.17
SPG11Q96JI7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.14■□□□□ 0.17
SPG11Q96JI7 TOB2P1-201ENST00000469761 992 ntBASIC16.14■□□□□ 0.17
SPG11Q96JI7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.14■□□□□ 0.17
SPG11Q96JI7 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SPG11Q96JI7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SPG11Q96JI7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.14■□□□□ 0.17
SPG11Q96JI7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.14■□□□□ 0.17
SPG11Q96JI7 AP001271.2-201ENST00000624018 1556 ntBASIC16.14■□□□□ 0.17
SPG11Q96JI7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SPG11Q96JI7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SPG11Q96JI7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.13■□□□□ 0.17
SPG11Q96JI7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SPG11Q96JI7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms