Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SNRNP40Q96DI7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SNRNP40Q96DI7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
SNRNP40Q96DI7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 UNC93B7-201ENST00000509439 705 ntBASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.14■□□□□ 0.33
SNRNP40Q96DI7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 AP002383.4-201ENST00000442518 975 ntBASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 FAAHP1-202ENST00000446499 1238 ntBASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SNRNP40Q96DI7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 AP005212.1-201ENST00000581547 1997 ntBASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 KRT17P6-201ENST00000453795 1220 ntBASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.12■□□□□ 0.33
SNRNP40Q96DI7 GPAT2P1-201ENST00000444924 1672 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms