Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.27■□□□□ 0.68
LRRC39Q96DD0 HLA-A-209ENST00000638375 975 ntBASIC19.27■□□□□ 0.68
LRRC39Q96DD0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LRRC39Q96DD0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.27■□□□□ 0.68
LRRC39Q96DD0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.27■□□□□ 0.67
LRRC39Q96DD0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.27■□□□□ 0.67
LRRC39Q96DD0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC39Q96DD0 NBPF21P-201ENST00000425093 1451 ntBASIC19.27■□□□□ 0.67
LRRC39Q96DD0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC39Q96DD0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC39Q96DD0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
LRRC39Q96DD0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
LRRC39Q96DD0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.27■□□□□ 0.67
LRRC39Q96DD0 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
LRRC39Q96DD0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
LRRC39Q96DD0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 AC005082.1-201ENST00000413042 2259 ntBASIC19.26■□□□□ 0.67
LRRC39Q96DD0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 AC138932.1-201ENST00000534164 6830 ntBASIC19.26■□□□□ 0.67
LRRC39Q96DD0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 AC004264.1-201ENST00000608354 794 ntBASIC19.26■□□□□ 0.67
LRRC39Q96DD0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LRRC39Q96DD0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 TSPY23P-201ENST00000440136 739 ntBASIC19.25■□□□□ 0.67
LRRC39Q96DD0 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 UNC93B5-201ENST00000530315 699 ntBASIC19.25■□□□□ 0.67
LRRC39Q96DD0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.25■□□□□ 0.67
LRRC39Q96DD0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 BICD1-207ENST00000551848 1962 ntBASIC19.24■□□□□ 0.67
LRRC39Q96DD0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.24■□□□□ 0.67
LRRC39Q96DD0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms