Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RFT1Q96AA3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.89■□□□□ 0.29
RFT1Q96AA3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RFT1Q96AA3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.89■□□□□ 0.29
RFT1Q96AA3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RFT1Q96AA3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RFT1Q96AA3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RFT1Q96AA3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.88■□□□□ 0.29
RFT1Q96AA3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFT1Q96AA3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFT1Q96AA3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFT1Q96AA3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFT1Q96AA3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFT1Q96AA3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.88■□□□□ 0.29
RFT1Q96AA3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFT1Q96AA3 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RFT1Q96AA3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFT1Q96AA3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFT1Q96AA3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.88■□□□□ 0.29
RFT1Q96AA3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFT1Q96AA3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFT1Q96AA3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFT1Q96AA3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RFT1Q96AA3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.88■□□□□ 0.29
RFT1Q96AA3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.88■□□□□ 0.29
RFT1Q96AA3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFT1Q96AA3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.88■□□□□ 0.29
RFT1Q96AA3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.88■□□□□ 0.29
RFT1Q96AA3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFT1Q96AA3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RFT1Q96AA3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RFT1Q96AA3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RFT1Q96AA3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.87■□□□□ 0.29
RFT1Q96AA3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.87■□□□□ 0.29
RFT1Q96AA3 AL031598.1-201ENST00000561511 1773 ntBASIC16.87■□□□□ 0.29
RFT1Q96AA3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.87■□□□□ 0.29
RFT1Q96AA3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.87■□□□□ 0.29
RFT1Q96AA3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.87■□□□□ 0.29
RFT1Q96AA3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
RFT1Q96AA3 AL512625.2-201ENST00000417533 625 ntBASIC16.87■□□□□ 0.29
RFT1Q96AA3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.87■□□□□ 0.29
RFT1Q96AA3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 AC023632.3-201ENST00000521633 145 ntBASIC16.87■□□□□ 0.29
RFT1Q96AA3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.87■□□□□ 0.29
RFT1Q96AA3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.87■□□□□ 0.29
RFT1Q96AA3 AC080038.1-201ENST00000611274 1154 ntBASIC16.87■□□□□ 0.29
RFT1Q96AA3 AC092437.1-201ENST00000624794 1048 ntBASIC16.87■□□□□ 0.29
RFT1Q96AA3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.87■□□□□ 0.29
RFT1Q96AA3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.87■□□□□ 0.29
RFT1Q96AA3 AC073111.5-205ENST00000641717 521 ntBASIC16.87■□□□□ 0.29
RFT1Q96AA3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.87■□□□□ 0.29
RFT1Q96AA3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
RFT1Q96AA3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.87■□□□□ 0.29
RFT1Q96AA3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RFT1Q96AA3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.87■□□□□ 0.29
RFT1Q96AA3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFT1Q96AA3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
RFT1Q96AA3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
RFT1Q96AA3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFT1Q96AA3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RFT1Q96AA3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.86■□□□□ 0.29
RFT1Q96AA3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.86■□□□□ 0.29
RFT1Q96AA3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFT1Q96AA3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RFT1Q96AA3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RFT1Q96AA3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.86■□□□□ 0.29
RFT1Q96AA3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFT1Q96AA3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.86■□□□□ 0.29
RFT1Q96AA3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFT1Q96AA3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFT1Q96AA3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.86■□□□□ 0.29
RFT1Q96AA3 AC105036.2-201ENST00000569468 176 ntBASIC16.86■□□□□ 0.29
RFT1Q96AA3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFT1Q96AA3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFT1Q96AA3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RFT1Q96AA3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFT1Q96AA3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFT1Q96AA3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.86■□□□□ 0.29
RFT1Q96AA3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RFT1Q96AA3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RFT1Q96AA3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.86■□□□□ 0.29
RFT1Q96AA3 MKRN4P-201ENST00000444706 1521 ntBASIC16.86■□□□□ 0.29
RFT1Q96AA3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.85■□□□□ 0.29
RFT1Q96AA3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RFT1Q96AA3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms