Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.63■□□□□ 0.25
USP9XQ93008 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
USP9XQ93008 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
USP9XQ93008 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.62■□□□□ 0.25
USP9XQ93008 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP9XQ93008 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP9XQ93008 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP9XQ93008 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP9XQ93008 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
USP9XQ93008 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP9XQ93008 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.62■□□□□ 0.25
USP9XQ93008 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
USP9XQ93008 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.62■□□□□ 0.25
USP9XQ93008 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.62■□□□□ 0.25
USP9XQ93008 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.62■□□□□ 0.25
USP9XQ93008 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.62■□□□□ 0.25
USP9XQ93008 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
USP9XQ93008 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.62■□□□□ 0.25
USP9XQ93008 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
USP9XQ93008 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
USP9XQ93008 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP9XQ93008 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.62■□□□□ 0.25
USP9XQ93008 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
USP9XQ93008 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
USP9XQ93008 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP9XQ93008 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
USP9XQ93008 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.62■□□□□ 0.25
USP9XQ93008 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.62■□□□□ 0.25
USP9XQ93008 RPL13AP23-201ENST00000480739 586 ntBASIC16.62■□□□□ 0.25
USP9XQ93008 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.62■□□□□ 0.25
USP9XQ93008 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP9XQ93008 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP9XQ93008 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
USP9XQ93008 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
USP9XQ93008 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP9XQ93008 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.61■□□□□ 0.25
USP9XQ93008 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.61■□□□□ 0.25
USP9XQ93008 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.61■□□□□ 0.25
USP9XQ93008 AC098831.1-202ENST00000438821 336 ntBASIC16.61■□□□□ 0.25
USP9XQ93008 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP9XQ93008 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.61■□□□□ 0.25
USP9XQ93008 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.61■□□□□ 0.25
USP9XQ93008 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.61■□□□□ 0.25
USP9XQ93008 MIR3917-201ENST00000580971 93 ntBASIC16.61■□□□□ 0.25
USP9XQ93008 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.61■□□□□ 0.25
USP9XQ93008 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.61■□□□□ 0.25
USP9XQ93008 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.61■□□□□ 0.25
USP9XQ93008 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP9XQ93008 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.61■□□□□ 0.25
USP9XQ93008 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
USP9XQ93008 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP9XQ93008 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP9XQ93008 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP9XQ93008 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.61■□□□□ 0.25
USP9XQ93008 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP9XQ93008 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
USP9XQ93008 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
USP9XQ93008 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP9XQ93008 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.61■□□□□ 0.25
USP9XQ93008 AC090616.6-201ENST00000582640 721 ntBASIC16.61■□□□□ 0.25
USP9XQ93008 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.61■□□□□ 0.25
USP9XQ93008 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
USP9XQ93008 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.61■□□□□ 0.25
USP9XQ93008 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.6■□□□□ 0.25
USP9XQ93008 NSUN5P1-202ENST00000421140 1535 ntBASIC16.6■□□□□ 0.25
USP9XQ93008 NSUN5P2-203ENST00000457352 1529 ntBASIC16.6■□□□□ 0.25
USP9XQ93008 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP9XQ93008 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
USP9XQ93008 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
USP9XQ93008 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP9XQ93008 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
USP9XQ93008 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP9XQ93008 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
USP9XQ93008 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP9XQ93008 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.6■□□□□ 0.25
USP9XQ93008 IGHV3-22-201ENST00000520721 359 ntBASIC16.6■□□□□ 0.25
USP9XQ93008 AC106730.1-201ENST00000566722 1090 ntBASIC16.6■□□□□ 0.25
USP9XQ93008 AC099336.1-202ENST00000602961 463 ntBASIC16.6■□□□□ 0.25
USP9XQ93008 MIR7706-201ENST00000613747 67 ntBASIC16.6■□□□□ 0.25
USP9XQ93008 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP9XQ93008 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP9XQ93008 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP9XQ93008 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
USP9XQ93008 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
USP9XQ93008 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
USP9XQ93008 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.6■□□□□ 0.25
USP9XQ93008 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP9XQ93008 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP9XQ93008 AC004967.1-201ENST00000453589 447 ntBASIC16.6■□□□□ 0.25
USP9XQ93008 AC091607.1-201ENST00000490318 1060 ntBASIC16.6■□□□□ 0.25
USP9XQ93008 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
USP9XQ93008 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP9XQ93008 FEM1AP4-201ENST00000443167 1987 ntBASIC16.6■□□□□ 0.25
USP9XQ93008 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC16.6■□□□□ 0.25
USP9XQ93008 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
USP9XQ93008 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms