Protein–RNA interactions for Protein: Q92973

TNPO1, Transportin-1, humanhuman

Known RBP Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1Q92973 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TNPO1Q92973 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TNPO1Q92973 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
TNPO1Q92973 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TNPO1Q92973 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC22.69■■□□□ 1.22
TNPO1Q92973 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
TNPO1Q92973 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TNPO1Q92973 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC22.68■■□□□ 1.22
TNPO1Q92973 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
TNPO1Q92973 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TNPO1Q92973 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.68■■□□□ 1.22
TNPO1Q92973 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNPO1Q92973 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNPO1Q92973 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
TNPO1Q92973 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNPO1Q92973 AC098590.1-201ENST00000468126 897 ntBASIC22.68■■□□□ 1.22
TNPO1Q92973 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNPO1Q92973 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNPO1Q92973 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.68■■□□□ 1.22
TNPO1Q92973 SOX15-203ENST00000570788 1093 ntBASIC22.68■■□□□ 1.22
TNPO1Q92973 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.68■■□□□ 1.22
TNPO1Q92973 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TNPO1Q92973 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TNPO1Q92973 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNPO1Q92973 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNPO1Q92973 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TNPO1Q92973 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.68■■□□□ 1.22
TNPO1Q92973 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNPO1Q92973 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNPO1Q92973 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.67■■□□□ 1.22
TNPO1Q92973 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNPO1Q92973 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNPO1Q92973 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TNPO1Q92973 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
TNPO1Q92973 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.67■■□□□ 1.22
TNPO1Q92973 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TNPO1Q92973 AL390719.1-204ENST00000412397 1219 ntBASIC22.67■■□□□ 1.22
TNPO1Q92973 AL158047.1-201ENST00000445918 881 ntBASIC22.67■■□□□ 1.22
TNPO1Q92973 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC22.67■■□□□ 1.22
TNPO1Q92973 AC093827.2-201ENST00000512654 315 ntBASIC22.67■■□□□ 1.22
TNPO1Q92973 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.67■■□□□ 1.22
TNPO1Q92973 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.67■■□□□ 1.22
TNPO1Q92973 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
TNPO1Q92973 AP000997.3-201ENST00000623333 2250 ntBASIC22.67■■□□□ 1.22
TNPO1Q92973 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
TNPO1Q92973 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC22.67■■□□□ 1.22
TNPO1Q92973 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC22.67■■□□□ 1.22
TNPO1Q92973 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TNPO1Q92973 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
TNPO1Q92973 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
TNPO1Q92973 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNPO1Q92973 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TNPO1Q92973 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNPO1Q92973 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC22.67■■□□□ 1.22
TNPO1Q92973 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
TNPO1Q92973 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC22.66■■□□□ 1.22
TNPO1Q92973 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC22.66■■□□□ 1.22
TNPO1Q92973 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNPO1Q92973 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TNPO1Q92973 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.66■■□□□ 1.22
TNPO1Q92973 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
TNPO1Q92973 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TNPO1Q92973 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
TNPO1Q92973 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNPO1Q92973 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNPO1Q92973 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.66■■□□□ 1.22
TNPO1Q92973 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC22.66■■□□□ 1.22
TNPO1Q92973 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC22.66■■□□□ 1.22
TNPO1Q92973 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC22.66■■□□□ 1.22
TNPO1Q92973 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNPO1Q92973 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
TNPO1Q92973 AC018553.1-201ENST00000616682 1458 ntBASIC22.66■■□□□ 1.22
TNPO1Q92973 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TNPO1Q92973 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
TNPO1Q92973 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TNPO1Q92973 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC22.65■■□□□ 1.22
TNPO1Q92973 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.65■■□□□ 1.22
TNPO1Q92973 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNPO1Q92973 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.65■■□□□ 1.22
TNPO1Q92973 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TNPO1Q92973 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNPO1Q92973 POM121L13P-201ENST00000422362 380 ntBASIC22.65■■□□□ 1.22
TNPO1Q92973 UBE2SP1-201ENST00000450587 669 ntBASIC22.65■■□□□ 1.22
TNPO1Q92973 RPS2P52-201ENST00000469610 820 ntBASIC22.65■■□□□ 1.22
TNPO1Q92973 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.65■■□□□ 1.22
TNPO1Q92973 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
TNPO1Q92973 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22.65■■□□□ 1.22
TNPO1Q92973 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNPO1Q92973 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TNPO1Q92973 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TNPO1Q92973 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC22.65■■□□□ 1.22
TNPO1Q92973 ZNF815P-204ENST00000434898 1737 ntBASIC22.65■■□□□ 1.22
TNPO1Q92973 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
TNPO1Q92973 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC22.65■■□□□ 1.22
TNPO1Q92973 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNPO1Q92973 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.65■■□□□ 1.22
TNPO1Q92973 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
TNPO1Q92973 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC22.65■■□□□ 1.22
TNPO1Q92973 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNPO1Q92973 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms