Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 KRT16P3-201ENST00000439127 1283 ntBASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 AC126544.1-201ENST00000580842 1059 ntBASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 AC135776.1-201ENST00000319817 2481 ntBASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.18■□□□□ 0.66
BCAS4Q8TDM0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 AL512631.2-201ENST00000604634 923 ntBASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.17■□□□□ 0.66
BCAS4Q8TDM0 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 AC008894.3-201ENST00000624324 3103 ntBASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.16■□□□□ 0.66
BCAS4Q8TDM0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 AC087633.2-202ENST00000565166 1439 ntBASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BCAS4Q8TDM0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BCAS4Q8TDM0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.66
BCAS4Q8TDM0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
BCAS4Q8TDM0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
BCAS4Q8TDM0 ZNF815P-204ENST00000434898 1737 ntBASIC19.14■□□□□ 0.66
BCAS4Q8TDM0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
BCAS4Q8TDM0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.14■□□□□ 0.65
BCAS4Q8TDM0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BCAS4Q8TDM0 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms