Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAM1L1Q8N609 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAM1L1Q8N609 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAM1L1Q8N609 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRAM1L1Q8N609 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 CCR12P-201ENST00000446203 998 ntBASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 AC133561.5-201ENST00000635547 218 ntBASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAM1L1Q8N609 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAM1L1Q8N609 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 LINC01568-207ENST00000641790 1380 ntBASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 AC211429.1-201ENST00000415277 523 ntBASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 TSPY17P-201ENST00000450329 467 ntBASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 AC145285.6-201ENST00000604632 637 ntBASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 AC012306.2-201ENST00000609350 630 ntBASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 AL023803.3-201ENST00000615559 522 ntBASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 AC097493.4-201ENST00000641197 219 ntBASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 AC116562.4-202ENST00000641738 218 ntBASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAM1L1Q8N609 KRT8P3-201ENST00000519669 1449 ntBASIC18.83■□□□□ 0.61
TRAM1L1Q8N609 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAM1L1Q8N609 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.83■□□□□ 0.61
TRAM1L1Q8N609 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAM1L1Q8N609 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TRAM1L1Q8N609 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAM1L1Q8N609 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRAM1L1Q8N609 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms