Protein–RNA interactions for Protein: Q8IWT3

CUL9, Cullin-9, humanhuman

Predictions only

Length 2,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9Q8IWT3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CUL9Q8IWT3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CUL9Q8IWT3 AL162377.1-201ENST00000618844 1793 ntBASIC19.32■□□□□ 0.68
CUL9Q8IWT3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CUL9Q8IWT3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CUL9Q8IWT3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.32■□□□□ 0.68
CUL9Q8IWT3 AC069262.1-201ENST00000539058 672 ntBASIC19.32■□□□□ 0.68
CUL9Q8IWT3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.32■□□□□ 0.68
CUL9Q8IWT3 AC005332.3-201ENST00000589904 676 ntBASIC19.32■□□□□ 0.68
CUL9Q8IWT3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.32■□□□□ 0.68
CUL9Q8IWT3 AC114341.1-201ENST00000618070 349 ntBASIC19.32■□□□□ 0.68
CUL9Q8IWT3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CUL9Q8IWT3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CUL9Q8IWT3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.32■□□□□ 0.68
CUL9Q8IWT3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CUL9Q8IWT3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CUL9Q8IWT3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CUL9Q8IWT3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 ARSEP1-201ENST00000420443 635 ntBASIC19.31■□□□□ 0.68
CUL9Q8IWT3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 AC008735.5-201ENST00000623544 497 ntBASIC19.31■□□□□ 0.68
CUL9Q8IWT3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 MRPL20P1-201ENST00000400819 433 ntBASIC19.31■□□□□ 0.68
CUL9Q8IWT3 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 UNC93B6-202ENST00000528242 690 ntBASIC19.31■□□□□ 0.68
CUL9Q8IWT3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.31■□□□□ 0.68
CUL9Q8IWT3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 MIR5100-201ENST00000579544 119 ntBASIC19.3■□□□□ 0.68
CUL9Q8IWT3 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 C20orf181-201ENST00000623918 480 ntBASIC19.3■□□□□ 0.68
CUL9Q8IWT3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 POM121L3P-201ENST00000419331 1163 ntBASIC19.3■□□□□ 0.68
CUL9Q8IWT3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 FGFR3P6-201ENST00000457012 610 ntBASIC19.3■□□□□ 0.68
CUL9Q8IWT3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 AC092902.6-201ENST00000641783 218 ntBASIC19.3■□□□□ 0.68
CUL9Q8IWT3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CUL9Q8IWT3 HEIH-201ENST00000623091 1652 ntBASIC19.3■□□□□ 0.68
CUL9Q8IWT3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.29■□□□□ 0.68
CUL9Q8IWT3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.29■□□□□ 0.68
CUL9Q8IWT3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.29■□□□□ 0.68
CUL9Q8IWT3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
CUL9Q8IWT3 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CUL9Q8IWT3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CUL9Q8IWT3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.29■□□□□ 0.68
CUL9Q8IWT3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
CUL9Q8IWT3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CUL9Q8IWT3 RPS2P28-201ENST00000314255 741 ntBASIC19.29■□□□□ 0.68
CUL9Q8IWT3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.29■□□□□ 0.68
CUL9Q8IWT3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CUL9Q8IWT3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.29■□□□□ 0.68
CUL9Q8IWT3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CUL9Q8IWT3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.29■□□□□ 0.68
CUL9Q8IWT3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CUL9Q8IWT3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CUL9Q8IWT3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CUL9Q8IWT3 AC093214.1-201ENST00000511688 1107 ntBASIC19.28■□□□□ 0.68
CUL9Q8IWT3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.28■□□□□ 0.68
CUL9Q8IWT3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CUL9Q8IWT3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CUL9Q8IWT3 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CUL9Q8IWT3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.28■□□□□ 0.68
CUL9Q8IWT3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.28■□□□□ 0.68
CUL9Q8IWT3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.28■□□□□ 0.68
CUL9Q8IWT3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CUL9Q8IWT3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CUL9Q8IWT3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CUL9Q8IWT3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms