Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TSPY21P-201ENST00000433481 731 ntBASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 AL049597.2-201ENST00000565575 961 ntBASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 AC010653.2-201ENST00000623505 997 ntBASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.13■□□□□ 0.81
SCN4BQ8IWT1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 AP003041.3-201ENST00000527151 707 ntBASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SCN4BQ8IWT1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SCN4BQ8IWT1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 AC104076.2-201ENST00000448912 469 ntBASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SCN4BQ8IWT1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.09■□□□□ 0.81
SCN4BQ8IWT1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms