Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 AC011498.5-201ENST00000592027 486 ntBASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NPAS4Q8IUM7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAS4Q8IUM7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 TSSC2-201ENST00000450217 709 ntBASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 MIR3652-201ENST00000579335 131 ntBASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 AC092329.2-201ENST00000598402 547 ntBASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 AL121672.3-201ENST00000608644 468 ntBASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 KRT8P3-201ENST00000519669 1449 ntBASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.43■□□□□ 0.86
NPAS4Q8IUM7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 BX276092.5-203ENST00000456199 560 ntBASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 SEC1P-202ENST00000473944 940 ntBASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPAS4Q8IUM7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms