Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 AL845331.1-201ENST00000424978 1190 ntBASIC20.22■□□□□ 0.83
RNF135Q8IUD6 AC112907.2-201ENST00000448639 330 ntBASIC20.22■□□□□ 0.83
RNF135Q8IUD6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 AFG3L1P-217ENST00000557444 2447 ntBASIC20.22■□□□□ 0.83
RNF135Q8IUD6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF135Q8IUD6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 AC099778.1-201ENST00000568593 1911 ntBASIC20.21■□□□□ 0.83
RNF135Q8IUD6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 AC083849.1-201ENST00000615227 514 ntBASIC20.21■□□□□ 0.83
RNF135Q8IUD6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF135Q8IUD6 BX119927.1-201ENST00000636596 1552 ntBASIC20.21■□□□□ 0.83
RNF135Q8IUD6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 KRT8P10-201ENST00000450021 1447 ntBASIC20.2■□□□□ 0.82
RNF135Q8IUD6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 AC004870.1-201ENST00000315132 882 ntBASIC20.2■□□□□ 0.82
RNF135Q8IUD6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 AP000593.1-201ENST00000393668 712 ntBASIC20.2■□□□□ 0.82
RNF135Q8IUD6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 PRELID1P1-202ENST00000567272 903 ntBASIC20.2■□□□□ 0.82
RNF135Q8IUD6 MIR3652-201ENST00000579335 131 ntBASIC20.2■□□□□ 0.82
RNF135Q8IUD6 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF135Q8IUD6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 KRT17P6-201ENST00000453795 1220 ntBASIC20.19■□□□□ 0.82
RNF135Q8IUD6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 AC004263.2-201ENST00000617183 678 ntBASIC20.19■□□□□ 0.82
RNF135Q8IUD6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF135Q8IUD6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms