Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 NME1-207ENST00000480143 964 ntTSL 2 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 KRT8P8-201ENST00000434750 1448 ntBASIC12.28□□□□□ -0.44
MRPL55Q7Z7F7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
MRPL55Q7Z7F7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
MRPL55Q7Z7F7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
MRPL55Q7Z7F7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL55Q7Z7F7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL55Q7Z7F7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL55Q7Z7F7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC12.27□□□□□ -0.44
MRPL55Q7Z7F7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL55Q7Z7F7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC12.27□□□□□ -0.44
MRPL55Q7Z7F7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC12.27□□□□□ -0.44
MRPL55Q7Z7F7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL55Q7Z7F7 AC004408.2-201ENST00000623613 2777 ntBASIC12.27□□□□□ -0.44
MRPL55Q7Z7F7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL55Q7Z7F7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
MRPL55Q7Z7F7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 MAP2K4P1-201ENST00000438453 1195 ntBASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 PNN-205ENST00000556530 601 ntTSL 2 BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 GXYLT1P5-201ENST00000614548 1189 ntBASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 AL109923.1-201ENST00000618799 583 ntBASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 AC133041.1-202ENST00000642053 222 ntBASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 AC141586.3-201ENST00000562166 1838 ntBASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 ANKRD18DP-204ENST00000455355 1975 ntBASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
MRPL55Q7Z7F7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 SOX15-203ENST00000570788 1093 ntBASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 AC120498.8-201ENST00000614275 531 ntBASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 AL121829.2-201ENST00000620908 328 ntBASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 AC011270.2-201ENST00000624293 2550 ntBASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms