Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 NIFKP9-201ENST00000419265 221 ntBASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 GCSHP5-201ENST00000443090 522 ntBASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 RARRES2P10-201ENST00000564312 460 ntBASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 HTR7P1-201ENST00000538670 1336 ntBASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 RPS2P4-201ENST00000476944 856 ntBASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.13■□□□□ 0.33
NHLRC1Q6VVB1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 AL161938.1-201ENST00000569833 2180 ntBASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 AC004980.1-204ENST00000429707 299 ntBASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.12■□□□□ 0.33
NHLRC1Q6VVB1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.11■□□□□ 0.33
NHLRC1Q6VVB1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms