Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 AL355075.4-201ENST00000554988 638 ntBASIC19.88■□□□□ 0.77
TRNP1Q6NT89 MIR4497-201ENST00000583208 89 ntBASIC19.88■□□□□ 0.77
TRNP1Q6NT89 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 AC004408.2-201ENST00000623613 2777 ntBASIC19.88■□□□□ 0.77
TRNP1Q6NT89 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 AC096733.2-201ENST00000609937 1394 ntBASIC19.87■□□□□ 0.77
TRNP1Q6NT89 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 RBM17P1-201ENST00000453646 1190 ntBASIC19.87■□□□□ 0.77
TRNP1Q6NT89 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.87■□□□□ 0.77
TRNP1Q6NT89 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 DGCR10-201ENST00000609839 495 ntBASIC19.86■□□□□ 0.77
TRNP1Q6NT89 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRNP1Q6NT89 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRNP1Q6NT89 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.85■□□□□ 0.77
TRNP1Q6NT89 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRNP1Q6NT89 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.85■□□□□ 0.77
TRNP1Q6NT89 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRNP1Q6NT89 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.85■□□□□ 0.77
TRNP1Q6NT89 MIR4785-201ENST00000585005 73 ntBASIC19.85■□□□□ 0.77
TRNP1Q6NT89 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.85■□□□□ 0.77
TRNP1Q6NT89 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
TRNP1Q6NT89 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TRNP1Q6NT89 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRNP1Q6NT89 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TRNP1Q6NT89 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRNP1Q6NT89 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRNP1Q6NT89 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRNP1Q6NT89 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRNP1Q6NT89 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRNP1Q6NT89 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRNP1Q6NT89 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRNP1Q6NT89 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRNP1Q6NT89 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRNP1Q6NT89 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRNP1Q6NT89 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.84■□□□□ 0.77
TRNP1Q6NT89 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRNP1Q6NT89 MFAP1P1-201ENST00000442257 1255 ntBASIC19.84■□□□□ 0.77
TRNP1Q6NT89 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRNP1Q6NT89 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.84■□□□□ 0.77
TRNP1Q6NT89 AC097488.1-201ENST00000507834 756 ntBASIC19.84■□□□□ 0.77
TRNP1Q6NT89 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.84■□□□□ 0.77
TRNP1Q6NT89 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.84■□□□□ 0.77
TRNP1Q6NT89 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
TRNP1Q6NT89 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.84■□□□□ 0.77
TRNP1Q6NT89 AP000525.1-201ENST00000608286 694 ntBASIC19.84■□□□□ 0.77
TRNP1Q6NT89 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.84■□□□□ 0.77
TRNP1Q6NT89 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms