Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 AP005901.3-202ENST00000581653 237 ntBASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRPF38BQ5VTL8 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 MIR5100-201ENST00000579544 119 ntBASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PRPF38BQ5VTL8 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 AC079834.2-201ENST00000609776 1949 ntBASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRPF38BQ5VTL8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 AP003733.1-201ENST00000491725 852 ntBASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 YBX1P5-201ENST00000509441 847 ntBASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 RNA5SP415-201ENST00000517246 115 ntBASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 AC012645.4-201ENST00000610691 1061 ntBASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
PRPF38BQ5VTL8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms