Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 AP005901.3-202ENST00000581653 237 ntBASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 AC090616.6-201ENST00000582640 721 ntBASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 Z69720.1-201ENST00000601483 472 ntBASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 AC112497.1-201ENST00000624824 639 ntBASIC31.21■■■□□ 2.59
SNAPC4Q5SXM2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC31.2■■■□□ 2.59
SNAPC4Q5SXM2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
SNAPC4Q5SXM2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SNAPC4Q5SXM2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC31.2■■■□□ 2.59
SNAPC4Q5SXM2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SNAPC4Q5SXM2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC31.2■■■□□ 2.58
SNAPC4Q5SXM2 BX842568.4-201ENST00000421222 227 ntBASIC31.2■■■□□ 2.58
SNAPC4Q5SXM2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC31.2■■■□□ 2.58
SNAPC4Q5SXM2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC31.2■■■□□ 2.58
SNAPC4Q5SXM2 AL592071.1-201ENST00000611956 408 ntBASIC31.2■■■□□ 2.58
SNAPC4Q5SXM2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
SNAPC4Q5SXM2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
SNAPC4Q5SXM2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
SNAPC4Q5SXM2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC31.19■■■□□ 2.58
SNAPC4Q5SXM2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC31.19■■■□□ 2.58
SNAPC4Q5SXM2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SNAPC4Q5SXM2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
SNAPC4Q5SXM2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SNAPC4Q5SXM2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC31.19■■■□□ 2.58
SNAPC4Q5SXM2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SNAPC4Q5SXM2 NUS1P2-201ENST00000417358 873 ntBASIC31.19■■■□□ 2.58
SNAPC4Q5SXM2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC31.19■■■□□ 2.58
SNAPC4Q5SXM2 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SNAPC4Q5SXM2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC31.18■■■□□ 2.58
SNAPC4Q5SXM2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC31.18■■■□□ 2.58
SNAPC4Q5SXM2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SNAPC4Q5SXM2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC31.18■■■□□ 2.58
SNAPC4Q5SXM2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
SNAPC4Q5SXM2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC31.18■■■□□ 2.58
SNAPC4Q5SXM2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SNAPC4Q5SXM2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
SNAPC4Q5SXM2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC31.18■■■□□ 2.58
SNAPC4Q5SXM2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SNAPC4Q5SXM2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC31.18■■■□□ 2.58
SNAPC4Q5SXM2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
SNAPC4Q5SXM2 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC31.18■■■□□ 2.58
SNAPC4Q5SXM2 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC31.18■■■□□ 2.58
SNAPC4Q5SXM2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
SNAPC4Q5SXM2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SNAPC4Q5SXM2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SNAPC4Q5SXM2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SNAPC4Q5SXM2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SNAPC4Q5SXM2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SNAPC4Q5SXM2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC31.17■■■□□ 2.58
SNAPC4Q5SXM2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC31.17■■■□□ 2.58
SNAPC4Q5SXM2 MOK-208ENST00000519058 917 ntTSL 2 BASIC31.17■■■□□ 2.58
SNAPC4Q5SXM2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC31.17■■■□□ 2.58
SNAPC4Q5SXM2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC31.17■■■□□ 2.58
SNAPC4Q5SXM2 AC104417.2-201ENST00000562989 1793 ntBASIC31.17■■■□□ 2.58
SNAPC4Q5SXM2 AC079834.2-201ENST00000609776 1949 ntBASIC31.17■■■□□ 2.58
SNAPC4Q5SXM2 NSUN5P1-202ENST00000421140 1535 ntBASIC31.16■■■□□ 2.58
SNAPC4Q5SXM2 NSUN5P2-203ENST00000457352 1529 ntBASIC31.16■■■□□ 2.58
SNAPC4Q5SXM2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SNAPC4Q5SXM2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC31.16■■■□□ 2.58
SNAPC4Q5SXM2 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC31.16■■■□□ 2.58
SNAPC4Q5SXM2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC31.16■■■□□ 2.58
SNAPC4Q5SXM2 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC31.16■■■□□ 2.58
SNAPC4Q5SXM2 AC148477.8-201ENST00000624298 468 ntBASIC31.16■■■□□ 2.58
SNAPC4Q5SXM2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC31.16■■■□□ 2.58
SNAPC4Q5SXM2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SNAPC4Q5SXM2 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC31.16■■■□□ 2.58
SNAPC4Q5SXM2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SNAPC4Q5SXM2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
SNAPC4Q5SXM2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC31.16■■■□□ 2.58
SNAPC4Q5SXM2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC31.16■■■□□ 2.58
SNAPC4Q5SXM2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SNAPC4Q5SXM2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SNAPC4Q5SXM2 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
SNAPC4Q5SXM2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC31.15■■■□□ 2.58
SNAPC4Q5SXM2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC31.15■■■□□ 2.58
SNAPC4Q5SXM2 KRT18P67-201ENST00000432816 1264 ntBASIC31.15■■■□□ 2.58
SNAPC4Q5SXM2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC31.15■■■□□ 2.58
SNAPC4Q5SXM2 AC106730.1-201ENST00000566722 1090 ntBASIC31.15■■■□□ 2.58
SNAPC4Q5SXM2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC31.15■■■□□ 2.58
SNAPC4Q5SXM2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SNAPC4Q5SXM2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
SNAPC4Q5SXM2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC31.15■■■□□ 2.58
SNAPC4Q5SXM2 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SNAPC4Q5SXM2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC31.15■■■□□ 2.58
SNAPC4Q5SXM2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC31.15■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms